C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 43 (amino acid system L transporter), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000412517 SLC43A2-005 ENSG00000167703 9606 - 17:1575501-1605085 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENST00000412517
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENST00000412517 4.897±0.00 1.111±0.00 5.315±0.00 1.138±0.00 0.621±0.00 0.257±0.00 1.304±0.00 0.860±0.00 2.839±0.96 69.980±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060R CIL_00060R_0002 CGP 17:1517718-1628886

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0006811 TAS ion transport
GO:0006865 TAS amino acid transport
GO:0016021 IEA integral component of membrane
GO:0055085 TAS transmembrane transport
GO:1902475 IEA L-alpha-amino acid transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169547 Slc43a2-201 protein_coding Mus_musculus 0 1417
ENSMUST00000108433 Slc43a2-002 protein_coding Mus_musculus 0 1417
ENSMUST00000042561 Slc43a2-001 protein_coding Mus_musculus 0 1417
ENSMUST00000151891 Slc43a2-003 retained_intron Mus_musculus 0 830
ENSMUST00000134112 Slc43a2-005 retained_intron Mus_musculus 0 640
ENSDART00000142298 slc43a2a-001 protein_coding Danio_rerio 0 553
ENSMUST00000155981 Slc43a2-006 processed_transcript Mus_musculus 0 420
ENSMUST00000145901 Slc43a2-004 processed_transcript Mus_musculus 0 281

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