C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal peptide, CUB domain, EGF-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043503 Scube3-001 ENSMUSG00000038677 10090 + 17:28142316-28174852 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043503
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043503 0.114±0.07 4.933±0.46 0.575±0.00 4.660±3.08 0.753±0.29 0.148±0.00 0.184±0.04 0.678±0.14 0.072±0.07 0.775±0.48 0.054±0.01 1.082±0.59 0.119±0.00 1.277±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UQ CIL_0008UQ_0002 VISTA 17:28043766-28646334
CIL_0002ET CIL_0002ET_0002 CGP 17:28066747-28174852
CIL_0002ES CIL_0002ES_0002 CGP 17:28142316-28205886

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005576 IEA extracellular region
GO:0009986 IEA cell surface
GO:0051260 ISS protein homooligomerization
GO:0051291 ISS protein heterooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274938 SCUBE3-001 protein_coding Homo_sapiens 0 3912

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