C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC63 homolog (S. cerevisiae) pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425785 SEC63P1-001 ENSG00000228057 9606 + 1:97545701-97546958 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000425785
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000425785 0.159±0.00 0.105±0.00 0.083±0.00 0.066±0.05 0.055±0.02 0.059±0.04 0.048±0.00 0.038±0.02 0.071±0.02 0.114±0.09 0.008±0.00 0.062±0.03 0.053±0.00 0.077±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007J2 CIL_0007J2_0001 UCNEbase 1:95311769-97837577
CIL_0007C5 CIL_0007C5_0002 CGP 1:96721665-97921049

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019937 Sec63-001 protein_coding Mus_musculus 0 1515
ENSMUST00000155410 Sec63-002 retained_intron Mus_musculus 0 1500
ENSMUST00000105496 Sec63-005 processed_transcript Mus_musculus 0 470
ENSMUST00000124613 Sec63-004 processed_transcript Mus_musculus 0 470
ENSMUST00000044248 Podn-201 protein_coding Mus_musculus 0.00002 55
ENSMUST00000130026 Podn-007 protein_coding Mus_musculus 0.00002 55
ENSMUST00000145491 Podn-003 processed_transcript Mus_musculus 0.00002 55
ENSMUST00000106708 Podn-002 protein_coding Mus_musculus 0.00002 55
ENSMUST00000106709 Podn-001 protein_coding Mus_musculus 0.00002 55

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