C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ARP5 actin-related protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000045644 Actr5-001 ENSMUSG00000037761 10090 + 2:158624888-158639211 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045644
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045644 1.261±0.29 1.232±0.00 1.303±0.12 2.639±0.23 1.498±0.54 1.454±0.39 0.603±0.29 1.490±0.27 1.395±0.77 1.762±0.79 0.698±0.30 2.158±0.81 2.194±0.56 2.058±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081Y CIL_00081Y_0002 VISTA 2:158139041-158740388
CIL_0004NU CIL_0004NU_0002 CGP 2:158610767-158639211
CIL_0004EB CIL_0004EB_0002 CGP 2:158624888-158766334

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006302 IEA double-strand break repair
GO:0006310 IEA DNA recombination
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0031011 IEA Ino80 complex
GO:0070914 IEA UV-damage excision repair

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000243903 ACTR5-001 protein_coding Homo_sapiens 0 1842

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