C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sad1 and UNC84 domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046259 Sun2-002 ENSMUSG00000042524 10090 - 15:79724073-79742536 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046259
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046259 21.303±4.15 42.594±4.08 23.054±2.51 9.703±2.44 51.977±14.40 28.574±2.24 14.210±2.22 11.073±1.88 8.261±2.88 31.300±4.86 20.684±4.72 20.710±6.33 3.301±1.24 4.468±1.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002XF CIL_0002XF_0002 CGP 15:79690895-79742536
CIL_0005NJ CIL_0005NJ_0002 CGP 15:79724070-79777849

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000784 IDA nuclear chromosome, telomeric region
GO:0000794 IDA condensed nuclear chromosome
GO:0005515 IPI protein binding
GO:0005521 IEA lamin binding
GO:0005635 IDA nuclear envelope
GO:0005637 IDA nuclear inner membrane
GO:0005768 IEA endosome
GO:0006998 IEA nuclear envelope organization
GO:0016021 IEA integral component of membrane
GO:0030335 IMP positive regulation of cell migration
GO:0031022 IMP nuclear migration along microfilament
GO:0031965 IEA nuclear membrane
GO:0034993 IEA SUN-KASH complex
GO:0042802 IEA identical protein binding
GO:0051642 IMP centrosome localization
GO:0090286 IEA cytoskeletal anchoring at nuclear membrane
GO:0090292 IEA nuclear matrix anchoring at nuclear membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000405018 SUN2-002 protein_coding Homo_sapiens 0 1659
ENST00000405510 SUN2-001 protein_coding Homo_sapiens 0 1897
ENST00000406622 SUN2-017 protein_coding Homo_sapiens 0 1897
ENST00000417332 SUN2-010 protein_coding Homo_sapiens 0 267
ENST00000420859 SUN2-008 protein_coding Homo_sapiens 0 267
ENST00000433561 SUN2-003 protein_coding Homo_sapiens 0 267
ENST00000438058 SUN2-009 protein_coding Homo_sapiens 0 267
ENST00000439339 SUN2-006 protein_coding Homo_sapiens 0 267
ENST00000452294 SUN2-005 protein_coding Homo_sapiens 0 267
ENST00000455125 SUN2-015 protein_coding Homo_sapiens 0 553
ENST00000456894 SUN2-004 protein_coding Homo_sapiens 0 370
ENST00000464202 SUN2-012 retained_intron Homo_sapiens 0 588
ENST00000469086 SUN2-013 retained_intron Homo_sapiens 0 453
ENST00000470642 SUN2-014 retained_intron Homo_sapiens 0 433
ENST00000477262 SUN2-019 retained_intron Homo_sapiens 0 521
ENST00000480307 SUN2-018 retained_intron Homo_sapiens 0 244
ENST00000494273 SUN2-007 retained_intron Homo_sapiens 0 267

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