C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetraspanin 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046750 Tspan33-001 ENSMUSG00000001763 10090 + 6:29694222-29718559 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046750
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046750 0.963±0.37 0.707±0.23 0.560±0.23 2.579±1.02 0.988±0.37 13.559±1.28 0.561±0.29 9.203±3.23 30.092±32.18 1.012±0.05 0.801±0.24 2.196±0.61 7.894±2.21 3.568±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YG CIL_0001YG_0002 CGP 6:29540827-29718559
CIL_00024K CIL_00024K_0003 CGP 6:29694222-29761365

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0009986 IDA cell surface
GO:0016021 IEA integral component of membrane
GO:0019899 IPI enzyme binding
GO:0051604 IMP protein maturation
GO:0090002 IMP establishment of protein localization to plasma membrane
GO:0097197 IDA tetraspanin-enriched microdomain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000486685 TSPAN33-001 protein_coding Homo_sapiens 0 1293
ENST00000496963 TSPAN33-003 retained_intron Homo_sapiens 0 327
ENST00000614309 TSPAN33-002 retained_intron Homo_sapiens 0 649

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