C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetraspanin 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486685 TSPAN33-001 ENSG00000158457 9606 + 7:129144892-129168796 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000486685
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000486685 2.207±0.00 17.479±0.00 8.981±0.00 5.159±4.78 8.314±0.00 2.406±1.11 1.761±0.78 35.022±33.24 7.119±5.30 2.273±1.95 1.581±0.00 2.576±0.78 7.971±3.57 19.078±14.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YG CIL_0001YG_0001 CGP 7:128954180-129169697
CIL_00024K CIL_00024K_0002 CGP 7:129144892-129213545

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IDA plasma membrane
GO:0009986 IEA cell surface
GO:0016021 IEA integral component of membrane
GO:0019899 IPI enzyme binding
GO:0051604 IDA protein maturation
GO:0090002 IDA establishment of protein localization to plasma membrane
GO:0097197 IEA tetraspanin-enriched microdomain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046750 Tspan33-001 protein_coding Mus_musculus 0 1293
ENSMUST00000115250 Tspan33-002 protein_coding Mus_musculus 0 1275
ENSMUST00000137925 Tspan33-003 retained_intron Mus_musculus 0 457

Loading