C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box and WD-40 domain protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046869 Fbxw4-001 ENSMUSG00000040913 10090 - 19:45578254-45660312 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046869
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046869 7.667±0.64 14.896±1.99 7.789±0.49 5.646±1.05 9.707±3.88 8.243±2.42 3.710±1.19 4.639±0.87 4.962±1.51 13.263±2.23 3.928±1.20 13.621±1.37 1.732±0.60 3.254±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZR CIL_0007ZR_0002 VISTA 19:45042853-45643685
CIL_00089J CIL_00089J_0002 VISTA 19:45175437-45776961
CIL_000942 CIL_000942_0002 VISTA 19:45193585-45794869
CIL_00099F CIL_00099F_0002 VISTA 19:45434459-46035623
CIL_00099E CIL_00099E_0002 VISTA 19:45446900-46047683
CIL_0005N9 CIL_0005N9_0002 CGP 19:45578254-45742915

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002053 IMP positive regulation of mesenchymal cell proliferation
GO:0016055 IEA Wnt signaling pathway
GO:0042733 IMP embryonic digit morphogenesis
GO:0051216 IMP cartilage development
GO:0060173 IGI limb development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331272 FBXW4-001 protein_coding Homo_sapiens 0 1596
ENST00000426721 FBXW4P1-001 processed_pseudogene Homo_sapiens 0 1251
ENST00000457105 FBXW4-002 processed_transcript Homo_sapiens 0 726
ENST00000470093 FBXW4-003 processed_transcript Homo_sapiens 0 616
ENST00000482428 FBXW4-004 processed_transcript Homo_sapiens 0 335
ENST00000489578 FBXW4-006 retained_intron Homo_sapiens 0 237

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