C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005N9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107829-ENSG00000107831 CGP 9606 10:101610664-101780369
GeneTranscriptPositionBiotype
ENSG00000107829 (FBXW4)
F-box and WD repeat domain containing 4 		ENST00000331272 (FBXW4-001) 101610666-101695259 protein_coding
ENST00000457105 (FBXW4-002) 101624747-101695295 processed_transcript
ENST00000470093 (FBXW4-003) 101610664-101626899 processed_transcript
ENST00000482428 (FBXW4-004) 101611657-101613153 processed_transcript
ENST00000489578 (FBXW4-006) 101673565-101676714 retained_intron
ENSG00000222051 (RNU6-1165P)
RNA, U6 small nuclear 1165, pseudogene 		ENST00000410119 (RNU6-1165P-201) 101622859-101622965 snRNA
ENSG00000224817 (RP11-190J1.3)
 ENST00000458489 (RP11-190J1.3-001) 101704652-101708401 lincRNA
CIL_0005N9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040913-ENSMUSG00000025219 CGP 10090 19:45578254-45742915
GeneTranscriptPositionBiotype
ENSMUSG00000025219 (Fgf8)
fibroblast growth factor 8 		ENSMUST00000026240 (Fgf8-001) 45736798-45742874 protein_coding
ENSMUST00000026241 (Fgf8-004) 45736818-45742873 protein_coding
ENSMUST00000111924 (Fgf8-005) 45736971-45742684 protein_coding
ENSMUST00000111925 (Fgf8-006) 45736990-45742684 protein_coding
ENSMUST00000111927 (Fgf8-003) 45736936-45742858 protein_coding
ENSMUST00000111928 (Fgf8-002) 45736813-45742915 protein_coding
ENSMUSG00000040913 (Fbxw4)
F-box and WD-40 domain protein 4 		ENSMUST00000046869 (Fbxw4-001) 45578254-45660312 protein_coding
ENSMUST00000159590 (Fbxw4-003) 45630875-45640803 protein_coding
ENSMUST00000160003 (Fbxw4-010) 45578795-45591842 protein_coding
ENSMUST00000160018 (Fbxw4-006) 45578449-45593499 protein_coding
ENSMUST00000160438 (Fbxw4-008) 45578912-45592661 protein_coding
ENSMUST00000160718 (Fbxw4-004) 45579762-45631139 retained_intron
ENSMUST00000161039 (Fbxw4-011) 45578797-45579890 retained_intron
ENSMUST00000161556 (Fbxw4-005) 45591461-45631139 retained_intron
ENSMUST00000162433 (Fbxw4-007) 45578614-45593467 protein_coding
ENSMUST00000162879 (Fbxw4-009) 45578841-45591842 protein_coding
ENSMUSG00000041035 (Dpcd)
deleted in primary ciliary dyskinesia 		ENSMUST00000047057 (Dpcd-201) 45560615-45578279 protein_coding
ENSMUST00000161373 (Dpcd-001) 45578277-45579763 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005N9_0001ENSG00000107829ENST00000331272ENST00000457105ENST00000470093ENST00000482428ENST00000489578ENSG00000222051ENST00000410119ENSG00000224817ENST00000458489CIL_0005N9_0002ENSMUSG00000025219ENSMUST00000026240ENSMUST00000026241ENSMUST00000111924ENSMUST00000111925ENSMUST00000111927ENSMUST00000111928ENSMUSG00000040913ENSMUST00000046869ENSMUST00000159590ENSMUST00000160003ENSMUST00000160018ENSMUST00000160438ENSMUST00000160718ENSMUST00000161039ENSMUST00000161556ENSMUST00000162433ENSMUST00000162879ENSMUSG00000041035ENSMUST00000047057ENSMUST00000161373
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005N9_0001ENSG00000107829ENST00000331272ENST00000457105ENST00000470093ENSG00000222051ENST00000410119ENSG00000224817ENST00000458489CIL_0005N9_0002ENSMUSG00000025219ENSMUST00000026240ENSMUST00000026241ENSMUST00000111924ENSMUST00000111925ENSMUST00000111927ENSMUST00000111928ENSMUSG00000040913ENSMUST00000046869ENSMUST00000159590ENSMUST00000160003ENSMUST00000161039ENSMUST00000162433ENSMUST00000162879ENSMUSG00000041035ENSMUST00000047057ENSMUST00000161373
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107829 ENST00000331272 34.687±0.00 29.336±0.00 0.470±0.00 12.099±10.72 21.125±20.08 34.984±0.00 30.008±0.00 23.698±0.00 5.906±4.75 19.147±18.05 29.147±28.45 10.314±6.86 9.840±5.76 14.318±12.64
ENST00000457105 N/A N/A 6.267±0.00 8.679±1.17 2.098±0.00 7.507±0.00 1.661±0.00 5.522±0.00 5.413±0.00 N/A 4.386±0.00 10.617±7.26 21.143±0.00 15.156±0.00
ENST00000470093 N/A N/A 0.679±0.00 N/A 0.489±0.00 N/A 0.354±0.00 N/A 1.241±0.00 N/A N/A N/A N/A N/A
ENST00000482428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000222051 ENST00000410119 N/A N/A N/A N/A N/A N/A 0.193±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000224817 ENST00000458489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.744±0.22 0.176±0.04 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025219 ENSMUST00000026240 N/A N/A 0.009±0.00 0.047±0.00 N/A N/A N/A N/A N/A N/A N/A 0.478±0.10 N/A 0.166±0.00
ENSMUST00000026241 N/A 0.062±0.00 N/A 0.063±0.00 N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A 0.262±0.14
ENSMUST00000111924 N/A N/A N/A 0.174±0.00 N/A N/A N/A N/A 0.050±0.02 N/A N/A 1.050±0.50 0.066±0.02 0.372±0.08
ENSMUST00000111925 N/A N/A N/A 0.168±0.01 N/A N/A N/A N/A N/A N/A N/A 0.832±0.29 N/A 0.211±0.03
ENSMUST00000111927 N/A N/A N/A 0.128±0.03 N/A N/A N/A 0.039±0.00 N/A N/A N/A 0.479±0.22 N/A 0.175±0.04
ENSMUST00000111928 N/A N/A N/A 0.215±0.13 N/A N/A 0.029±0.00 N/A 0.019±0.00 N/A N/A 0.755±0.26 0.055±0.00 0.283±0.12
ENSMUSG00000040913 ENSMUST00000046869 7.667±0.64 14.896±1.99 7.789±0.49 5.646±1.05 9.707±3.88 8.243±2.42 3.710±1.19 4.639±0.87 4.962±1.51 13.263±2.23 3.928±1.20 13.621±1.37 1.732±0.60 3.254±0.74
ENSMUST00000159590 N/A N/A N/A 14.868±0.00 N/A N/A N/A N/A N/A N/A N/A 18.434±0.00 6.747±2.54 N/A
ENSMUST00000160003 N/A 85.157±6.66 N/A N/A N/A N/A N/A N/A 15.532±0.98 N/A N/A 84.928±18.59 N/A N/A
ENSMUST00000160018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161039 N/A 46.973±0.00 N/A N/A N/A 18.352±0.07 N/A N/A 10.341±1.15 N/A N/A N/A N/A N/A
ENSMUST00000161556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162433 N/A N/A N/A N/A N/A N/A 5.910±1.02 N/A 4.680±0.69 17.716±0.00 N/A 28.504±5.13 N/A N/A
ENSMUST00000162879 N/A N/A N/A N/A 18.482±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000041035 ENSMUST00000047057 6.042±0.26 N/A 9.375±2.24 11.298±2.45 4.239±0.00 N/A 3.600±0.16 7.616±0.94 6.145±2.56 N/A 4.951±0.30 14.704±1.68 5.959±1.43 13.113±3.06
ENSMUST00000161373 23.435±4.06 N/A 13.793±1.18 13.520±1.82 33.834±6.37 20.262±4.93 14.473±2.48 13.594±2.31 10.162±1.83 31.654±4.76 12.173±1.10 30.628±10.19 7.746±4.77 N/A

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