C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: immunoglobulin superfamily, member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047194 Igsf6-201 ENSMUSG00000035004 10090 - 7:121064067-121074530 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047194
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047194 1.398±0.54 0.996±0.29 1.208±0.00 0.526±0.00 1.799±0.54 0.569±0.23 0.529±0.05 0.200±0.10 3.445±3.36 1.444±0.69 0.112±0.04 1.595±0.47 0.460±0.14 0.117±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RG CIL_0008RG_0002 VISTA 7:120952178-121553246
CIL_0003HL CIL_0003HL_0002 CGP 7:121034445-121076834
CIL_0003I0 CIL_0003I0_0002 CGP 7:121064067-121163097

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268389 IGSF6-001 protein_coding Homo_sapiens 0 427
ENST00000565499 IGSF6-002 retained_intron Homo_sapiens 0 213

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