C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: katanin p60 subunit A-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047257 Katnal1-001 ENSMUSG00000041298 10090 - 5:148874332-148928647 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047257
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047257 1.571±0.20 0.727±0.04 1.738±0.00 8.608±4.56 0.938±0.28 0.566±0.12 1.751±0.41 2.157±1.10 1.400±0.97 0.942±0.19 1.034±0.21 2.090±0.99 1.281±0.29 15.023±0.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003E1 CIL_0003E1_0002 CGP 5:148504631-148995223

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0006200 IDA:IEA ATP catabolic process
GO:0007283 IMP spermatogenesis
GO:0008017 IEA microtubule binding
GO:0008568 IDA microtubule-severing ATPase activity
GO:0015630 IDA microtubule cytoskeleton
GO:0051013 IDA microtubule severing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380615 KATNAL1-001 protein_coding Homo_sapiens 0 1591
ENST00000380617 KATNAL1-002 protein_coding Homo_sapiens 0 1613

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