C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PR domain containing 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047577 Prdm14-001 ENSMUSG00000042414 10090 - 1:13113457-13127163 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverOvaryPlacentaTestisENSMUST00000047577
Transcript ID Adipose Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000047577 0.016±0.00 0.014±0.01 0.036±0.00 0.288±0.07 0.020±0.01 0.041±0.01 0.051±0.00 0.208±0.18 0.022±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BE CIL_0003BE_0002 CGP 1:12866549-13127163
CIL_0007ME CIL_0007ME_0002 UCNEbase 1:13097855-13197231
CIL_0003BO CIL_0003BO_0002 CGP 1:13113457-13374083

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IMP cell morphogenesis
GO:0001708 IMP cell fate specification
GO:0001827 IDA inner cell mass cell fate commitment
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007281 IMP germ cell development
GO:0008168 IEA methyltransferase activity
GO:0009566 IMP fertilization
GO:0010468 IMP regulation of gene expression
GO:0030718 IMP germ-line stem cell maintenance
GO:0034972 IDA histone H3-R26 methylation
GO:0040029 IGI regulation of gene expression, epigenetic
GO:0040037 IMP negative regulation of fibroblast growth factor receptor signaling pathway
GO:0044030 IMP regulation of DNA methylation
GO:0046872 IEA metal ion binding
GO:0048873 IMP homeostasis of number of cells within a tissue

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276594 PRDM14-001 protein_coding Homo_sapiens 0 972

Loading