C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003BO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147596-ENSG00000140396 CGP 9606 8:70051651-70403805
GeneTranscriptPositionBiotype
ENSG00000140396 (NCOA2)
nuclear receptor coactivator 2 		ENST00000452400 (NCOA2-001) 70109762-70403805 protein_coding
ENST00000518287 (NCOA2-002) 70112070-70402079 nonsense_mediated_decay
ENST00000518363 (NCOA2-005) 70113569-70148460 protein_coding
ENST00000519724 (NCOA2-004) 70216696-70245375 protein_coding
ENST00000520416 (NCOA2-003) 70216721-70402587 protein_coding
ENST00000521239 (NCOA2-007) 70126609-70128747 retained_intron
ENST00000522054 (NCOA2-006) 70137973-70141242 retained_intron
ENST00000524223 (NCOA2-008) 70155971-70157146 processed_transcript
ENSG00000147596 (PRDM14)
PR domain containing 14 		ENST00000276594 (PRDM14-001) 70051651-70071327 protein_coding
ENST00000426346 (PRDM14-002) 70069562-70071693 protein_coding
ENSG00000207036 (RNY3P14)
RNA, Ro-associated Y3 pseudogene 14 		ENST00000384309 (RNY3P14-201) 70357347-70357448 misc_RNA
ENSG00000213003 (BTF3P12)
basic transcription factor 3 pseudogene 12 		ENST00000519620 (BTF3P12-001) 70273369-70273837 processed_pseudogene
ENSG00000253173 (RP11-152C15.1)
 ENST00000521867 (RP11-152C15.1-001) 70103798-70104179 processed_pseudogene
CIL_0003BO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042414-ENSMUSG00000005886 CGP 10090 1:13113457-13374083
GeneTranscriptPositionBiotype
ENSMUSG00000005886 (Ncoa2)
nuclear receptor coactivator 2 		ENSMUST00000006037 (Ncoa2-002) 13142475-13374083 protein_coding
ENSMUST00000068304 (Ncoa2-201) 13139159-13374083 protein_coding
ENSMUST00000081713 (Ncoa2-001) 13139105-13372439 protein_coding
ENSMUST00000124088 (Ncoa2-005) 13184606-13374029 retained_intron
ENSMUST00000133232 (Ncoa2-008) 13148429-13151018 retained_intron
ENSMUST00000139970 (Ncoa2-006) 13182284-13372429 retained_intron
ENSMUST00000143603 (Ncoa2-004) 13165925-13374029 retained_intron
ENSMUST00000145280 (Ncoa2-007) 13190106-13299722 protein_coding
ENSMUST00000146784 (Ncoa2-009) 13146599-13148507 retained_intron
ENSMUST00000147927 (Ncoa2-003) 13164501-13374083 retained_intron
ENSMUST00000185275 (Ncoa2-010) 13145301-13146630 processed_transcript
ENSMUSG00000042414 (Prdm14)
PR domain containing 14 		ENSMUST00000047577 (Prdm14-001) 13113457-13127163 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003BO_0001ENSG00000140396ENST00000452400ENST00000518287ENST00000518363ENST00000519724ENST00000520416ENST00000521239ENST00000522054ENST00000524223ENSG00000147596ENST00000276594ENST00000426346ENSG00000207036ENST00000384309ENSG00000213003ENST00000519620ENSG00000253173ENST00000521867CIL_0003BO_0002ENSMUSG00000005886ENSMUST00000006037ENSMUST00000068304ENSMUST00000081713ENSMUST00000124088ENSMUST00000133232ENSMUST00000139970ENSMUST00000143603ENSMUST00000145280ENSMUST00000146784ENSMUST00000147927ENSMUST00000185275ENSMUSG00000042414ENSMUST00000047577
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003BO_0001ENSG00000140396ENST00000452400ENST00000518287ENST00000518363ENSG00000147596ENST00000276594ENST00000426346ENSG00000207036ENST00000384309ENSG00000213003ENST00000519620ENSG00000253173ENST00000521867CIL_0003BO_0002ENSMUSG00000005886ENSMUST00000006037ENSMUST00000068304ENSMUST00000081713ENSMUST00000145280ENSMUSG00000042414ENSMUST00000047577
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140396 ENST00000452400 2.433±0.00 1.212±0.00 N/A 3.812±0.20 2.283±0.08 3.386±0.84 2.767±1.36 2.285±0.46 2.669±1.32 2.669±1.54 0.955±0.00 2.944±1.61 1.511±0.18 3.713±0.00
ENST00000518287 N/A N/A N/A N/A 1.183±0.00 N/A 1.041±0.00 N/A 1.476±0.00 N/A 1.071±0.00 N/A N/A N/A
ENST00000518363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.403±0.00 N/A N/A
ENST00000519724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000147596 ENST00000276594 N/A N/A N/A 0.007±0.00 0.060±0.00 N/A N/A 0.034±0.00 0.007±0.00 0.022±0.01 0.015±0.00 0.041±0.00 N/A 0.436±0.00
ENST00000426346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A N/A N/A
ENSG00000207036 ENST00000384309 N/A 0.189±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213003 ENST00000519620 0.221±0.00 0.175±0.00 N/A N/A 0.303±0.27 N/A N/A 1.005±0.86 0.076±0.00 N/A 0.025±0.00 0.252±0.00 0.111±0.00 0.053±0.00
ENSG00000253173 ENST00000521867 0.052±0.00 0.165±0.00 N/A 0.060±0.00 0.115±0.00 0.053±0.00 N/A 0.057±0.00 N/A N/A 0.095±0.00 N/A 0.205±0.00 0.050±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005886 ENSMUST00000006037 5.137±2.51 4.508±1.66 3.199±0.00 5.516±3.27 5.243±2.08 4.941±0.73 2.632±0.83 4.846±1.45 2.087±0.54 3.843±0.84 N/A 7.025±2.75 4.768±3.87 10.881±5.35
ENSMUST00000068304 2.588±1.21 3.486±1.08 2.045±0.00 3.786±1.91 2.681±1.09 3.615±1.84 2.441±1.09 3.617±1.68 2.310±1.61 5.799±0.18 1.183±0.23 3.798±1.89 4.107±1.64 3.738±0.98
ENSMUST00000081713 N/A 2.358±0.79 N/A N/A 1.025±0.00 2.042±0.45 0.849±0.01 1.441±0.36 N/A 1.866±0.11 0.305±0.06 3.115±0.07 1.122±0.00 2.280±0.00
ENSMUST00000124088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145280 N/A N/A N/A 72.741±0.00 N/A N/A N/A N/A N/A N/A N/A 58.782±0.00 46.370±10.57 61.570±0.00
ENSMUST00000146784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042414 ENSMUST00000047577 0.016±0.00 N/A N/A 0.014±0.01 0.036±0.00 0.288±0.07 N/A 0.020±0.01 0.041±0.01 N/A N/A 0.051±0.00 0.208±0.18 0.022±0.01

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