C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PR domain containing 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000276594 PRDM14-001 ENSG00000147596 9606 - 8:70051651-70071327 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLiverLungMuscleOvaryTestisENST00000276594
Transcript ID Brain Breast Kidney Liver Lung Muscle Ovary Testis
ENST00000276594 0.007±0.00 0.060±0.00 0.034±0.00 0.007±0.00 0.022±0.01 0.015±0.00 0.041±0.00 0.436±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BE CIL_0003BE_0001 CGP 8:69667047-70071693
CIL_0007ME CIL_0007ME_0001 UCNEbase 8:70008937-70182178
CIL_0003BO CIL_0003BO_0001 CGP 8:70051651-70403805

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IEA cell morphogenesis
GO:0001708 IEA cell fate specification
GO:0001827 IEA inner cell mass cell fate commitment
GO:0003677 IEA DNA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007281 IEA germ cell development
GO:0008168 IEA methyltransferase activity
GO:0009566 IEA fertilization
GO:0010468 IEA regulation of gene expression
GO:0030718 IEA germ-line stem cell maintenance
GO:0034972 IEA histone H3-R26 methylation
GO:0040029 IEA regulation of gene expression, epigenetic
GO:0040037 IEA negative regulation of fibroblast growth factor receptor signaling pathway
GO:0044030 IEA regulation of DNA methylation
GO:0046872 IEA metal ion binding
GO:0048873 IEA homeostasis of number of cells within a tissue

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047577 Prdm14-001 protein_coding Mus_musculus 0 972

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