Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	phospholipase A2, group VI
ENSMUST00000047816	Pla2g6-003	ENSMUSG00000042632	10090	-	15:79286228-79328228	protein_coding

Expression Patterns

Transcript ID	Colon	Heart	Kidney	Liver	Muscle	Ovary	Placenta
ENSMUST00000047816	1.041±0.00	0.762±0.00	1.936±0.00	2.120±0.26	1.854±0.00	3.442±0.00	2.687±0.31

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_00099H	CIL_00099H_0002	VISTA	15:78863840-79464236
CIL_0008KJ	CIL_0008KJ_0002	VISTA	15:78865517-79466323
CIL_0008BX	CIL_0008BX_0002	VISTA	15:78873761-79474273
CIL_0008KA	CIL_0008KA_0002	VISTA	15:78875821-79476550
CIL_00082J	CIL_00082J_0002	VISTA	15:78908803-79509777
CIL_0008C1	CIL_0008C1_0002	VISTA	15:78918952-79520098
CIL_00082K	CIL_00082K_0002	VISTA	15:78923635-79524085
CIL_0008MM	CIL_0008MM_0002	VISTA	15:79023554-79624112
CIL_0007CL	CIL_0007CL_0002	CGP	15:79258195-79328390
CIL_0003QB	CIL_0003QB_0002	CGP	15:79286228-79359072

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005516	IEA	calmodulin binding
GO:0006935	IEA	chemotaxis
GO:0016020	IEA	membrane
GO:0016042	IEA	lipid catabolic process

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENST00000332509	PLA2G6-001	protein_coding	Homo_sapiens	0	1360
ENST00000335539	PLA2G6-201	protein_coding	Homo_sapiens	0	2632
ENST00000402064	PLA2G6-002	protein_coding	Homo_sapiens	0	2610
ENST00000435484	PLA2G6-003	protein_coding	Homo_sapiens	0	307
ENST00000448094	PLA2G6-023	nonsense_mediated_decay	Homo_sapiens	0	531
ENST00000454670	PLA2G6-026	nonsense_mediated_decay	Homo_sapiens	0	507
ENST00000463287	PLA2G6-025	retained_intron	Homo_sapiens	0	318
ENST00000491986	PLA2G6-022	retained_intron	Homo_sapiens	0	403
ENST00000496409	PLA2G6-024	retained_intron	Homo_sapiens	0	318

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