C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipase A2, group VI (cytosolic, calcium-independent)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000448094 PLA2G6-023 ENSG00000184381 9606 - 22:38116094-38135063 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000448094
Transcript ID Colon
ENST00000448094 1.094±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099H CIL_00099H_0001 VISTA 22:37683926-38284300
CIL_0008KJ CIL_0008KJ_0001 VISTA 22:37685616-38286450
CIL_0008BX CIL_0008BX_0001 VISTA 22:37696030-38296592
CIL_0008KA CIL_0008KA_0001 VISTA 22:37698338-38299192
CIL_00082J CIL_00082J_0001 VISTA 22:37733233-38334508
CIL_0008C1 CIL_0008C1_0001 VISTA 22:37746133-38346872
CIL_00082K CIL_00082K_0001 VISTA 22:37750385-38350990
CIL_0008MM CIL_0008MM_0001 VISTA 22:37872841-38473542
CIL_0007CL CIL_0007CL_0001 CGP 22:38084889-38205690
CIL_0003QB CIL_0003QB_0001 CGP 22:38111495-38216511

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174375 Pla2g6-009 retained_intron Mus_musculus 0 531
ENSMUST00000172403 Pla2g6-001 protein_coding Mus_musculus 0 531
ENSMUST00000047816 Pla2g6-003 protein_coding Mus_musculus 0 531
ENSMUST00000173163 Pla2g6-004 protein_coding Mus_musculus 0 531
ENSMUST00000166977 Pla2g6-002 protein_coding Mus_musculus 0 531
ENSMUST00000174021 Pla2g6-005 protein_coding Mus_musculus 0 531

Loading