C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil and C2 domain containing 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048150 Cc2d2a-001 ENSMUSG00000039765 10090 + 5:43662379-43740972 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000048150
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000048150 0.708±0.08 0.580±0.13 1.031±0.00 0.653±0.11 0.434±0.00 0.572±0.01 0.159±0.00 0.391±0.08 1.480±0.76 0.214±0.06 0.143±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DZ CIL_0003DZ_0003 CGP 5:43515569-43740972
CIL_00026J CIL_00026J_0002 CGP 5:43662379-43821639

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007224 IMP smoothened signaling pathway
GO:0035869 IDA ciliary transition zone
GO:0036038 IDA TCTN-B9D complex
GO:0042384 IMP cilium assembly
GO:0060271 IMP cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000389652 CC2D2A-010 protein_coding Homo_sapiens 0 3145
ENST00000424120 CC2D2A-201 protein_coding Homo_sapiens 0 4638
ENST00000503292 CC2D2A-002 protein_coding Homo_sapiens 0 4630
ENST00000506643 CC2D2A-012 nonsense_mediated_decay Homo_sapiens 0 2621
ENST00000510220 CC2D2A-017 retained_intron Homo_sapiens 0 270
ENST00000512202 CC2D2A-014 retained_intron Homo_sapiens 0 610
ENST00000512702 CC2D2A-003 protein_coding Homo_sapiens 0 1363
ENST00000513035 CC2D2A-015 retained_intron Homo_sapiens 0 220
ENST00000513811 CC2D2A-008 processed_transcript Homo_sapiens 0 1655
ENST00000514039 CC2D2A-016 processed_transcript Homo_sapiens 0 460

Loading