C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil and C2 domain containing 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000389652 CC2D2A-010 ENSG00000048342 9606 + 4:15479223-15601546 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverOvaryPlacentaTestisENST00000389652
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000389652 0.504±0.00 0.944±0.00 0.712±0.00 0.777±0.19 0.808±0.00 0.599±0.00 1.773±0.00 0.796±0.30 0.905±0.00 1.100±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DZ CIL_0003DZ_0002 CGP 4:15339818-15601557
CIL_00026J CIL_00026J_0001 CGP 4:15469865-15681679

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007224 ISS smoothened signaling pathway
GO:0035869 ISS ciliary transition zone
GO:0036038 ISS TCTN-B9D complex
GO:0042384 ISS cilium assembly
GO:0060271 ISS cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048150 Cc2d2a-001 protein_coding Mus_musculus 0 3145
ENSMUST00000125866 Cc2d2a-005 protein_coding Mus_musculus 0 2542
ENSMUST00000127355 Cc2d2a-003 retained_intron Mus_musculus 0 1554
ENSMUST00000156034 Cc2d2a-002 protein_coding Mus_musculus 0 1317

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