C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, FYVE domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048319 Zfyve1-201 ENSMUSG00000042628 10090 - 12:83546941-83597147 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048319
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048319 9.570±2.50 11.917±1.40 11.254±1.10 10.256±4.18 10.604±2.98 13.004±2.43 2.735±0.25 9.284±0.90 11.113±4.95 9.560±2.13 5.685±0.57 10.029±3.52 14.702±7.44 6.772±2.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008P0 CIL_0008P0_0002 VISTA 12:83418739-84022790
CIL_0000UK CIL_0000UK_0002 CGP 12:83520466-83597147
CIL_0001TO CIL_0001TO_0002 CGP 12:83546941-83683123

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000407 ISO pre-autophagosomal structure
GO:0005515 IEA protein binding
GO:0005545 ISS 1-phosphatidylinositol binding
GO:0005547 IEA phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005776 ISO autophagic vacuole
GO:0005783 ISS endoplasmic reticulum
GO:0005795 ISS Golgi stack
GO:0010923 ISS negative regulation of phosphatase activity
GO:0043325 IEA phosphatidylinositol-3,4-bisphosphate binding
GO:0044233 IEA ER-mitochondrion membrane contact site
GO:0046872 IEA metal ion binding
GO:0048471 ISS perinuclear region of cytoplasm
GO:0097629 IEA extrinsic component of omegasome membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318876 ZFYVE1-002 protein_coding Homo_sapiens 0 2139
ENST00000394207 ZFYVE1-004 protein_coding Homo_sapiens 0 1498
ENST00000553891 ZFYVE1-005 protein_coding Homo_sapiens 0 3184
ENST00000554145 ZFYVE1-009 processed_transcript Homo_sapiens 0 558
ENST00000554250 ZFYVE1-006 retained_intron Homo_sapiens 0 387
ENST00000555072 ZFYVE1-003 protein_coding Homo_sapiens 0 1495
ENST00000556040 ZFYVE1-007 retained_intron Homo_sapiens 0 809
ENST00000556143 ZFYVE1-001 protein_coding Homo_sapiens 0 3402
ENST00000556761 ZFYVE1-008 retained_intron Homo_sapiens 0 377
ENST00000560455 RP11-38G5.3-001 processed_pseudogene Homo_sapiens 0 198

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