C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA A830018L16 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048613 A830018L16Rik-001 ENSMUSG00000057715 10090 + 1:11414105-11975901 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainKidneyLiverLungMuscleOvaryENSMUST00000048613
Transcript ID Bladder Brain Kidney Liver Lung Muscle Ovary
ENSMUST00000048613 0.021±0.00 0.311±0.01 0.042±0.00 0.003±0.00 0.124±0.00 0.016±0.00 0.413±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SD CIL_0001SD_0003 CGP 1:10993465-11975901
CIL_0001SG CIL_0001SG_0003 CGP 1:11414105-12861192

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337103 C8orf34-002 protein_coding Homo_sapiens 0 1489
ENST00000348340 C8orf34-003 protein_coding Homo_sapiens 0 1070
ENST00000349492 C8orf34-008 processed_transcript Homo_sapiens 0 483
ENST00000518698 C8orf34-001 protein_coding Homo_sapiens 0 1585
ENST00000521406 C8orf34-006 nonsense_mediated_decay Homo_sapiens 0 782
ENST00000523686 C8orf34-005 protein_coding Homo_sapiens 0 483

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