C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 8 open reading frame 34
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000518698 C8orf34-001 ENSG00000165084 9606 + 8:68330722-68818561 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLungOvaryPlacentaTestisENST00000518698
Transcript ID Adrenal Brain Breast Colon Lung Ovary Placenta Testis
ENST00000518698 0.118±0.00 0.740±0.15 0.857±0.79 0.048±0.00 1.571±0.17 0.459±0.46 0.030±0.01 0.060±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SD CIL_0001SD_0002 CGP 8:67952118-68819022
CIL_0001SG CIL_0001SG_0002 CGP 8:68330722-69660915

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185882 A830018L16Rik-008 protein_coding Mus_musculus 0 1642
ENSMUST00000137824 A830018L16Rik-002 protein_coding Mus_musculus 0 1642
ENSMUST00000048613 A830018L16Rik-001 protein_coding Mus_musculus 0 1585
ENSMUST00000179089 A830018L16Rik-009 protein_coding Mus_musculus 0 1382
ENSMUST00000141512 A830018L16Rik-005 nonsense_mediated_decay Mus_musculus 0 1232
ENSMUST00000171690 A830018L16Rik-201 protein_coding Mus_musculus 0 1072
ENSMUST00000135014 A830018L16Rik-003 protein_coding Mus_musculus 0 1070
ENSMUST00000141339 A830018L16Rik-007 protein_coding Mus_musculus 0 647
ENSMUST00000142117 A830018L16Rik-004 processed_transcript Mus_musculus 0 483

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