C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 647
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048854 Zfp647-201 ENSMUSG00000054967 10090 - 15:76910851-76918010 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048854
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048854 0.342±0.00 0.618±0.00 5.051±2.62 0.464±0.02 1.036±0.29 0.676±0.16 0.863±0.00 0.338±0.11 0.635±0.18 0.268±0.09 2.374±0.17 0.304±0.17 0.177±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099W CIL_00099W_0002 VISTA 15:76709335-77309403
CIL_00094Q CIL_00094Q_0002 VISTA 15:76736640-77338764
CIL_0008TT CIL_0008TT_0002 VISTA 15:76789079-77390092

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000097363 zgc:174712-201 protein_coding Danio_rerio 0.000002 58
ENSDART00000134277 zgc:174712-001 protein_coding Danio_rerio 0.000002 58
ENSDART00000108656 si:dkey-34m19.3-001 protein_coding Danio_rerio 0.00003 55
ENSDART00000151488 si:dkey-34m19.3-002 protein_coding Danio_rerio 0.00003 55
ENSDART00000106503 si:dkey-4c15.15-201 protein_coding Danio_rerio 0.00003 55
ENST00000292579 ZNF250-001 protein_coding Homo_sapiens 0 1219
ENST00000328070 ZNF71-001 protein_coding Homo_sapiens 0.000002 60
ENST00000340042 GLI4-201 protein_coding Homo_sapiens 1e-18 99
ENST00000370249 ZNF275-003 protein_coding Homo_sapiens 0.00000005 66
ENST00000370251 ZNF275-001 protein_coding Homo_sapiens 0.00000005 66
ENST00000417550 ZNF250-005 protein_coding Homo_sapiens 0 1219
ENST00000517530 GLI4-010 protein_coding Homo_sapiens 0.000000000002 77
ENST00000522452 ZFP41-001 protein_coding Homo_sapiens 0.00000000001 77
ENST00000523522 GLI4-001 protein_coding Homo_sapiens 1e-18 99
ENST00000523812 GLI4-002 processed_transcript Homo_sapiens 2e-18 99

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