C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 55
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049323 Wdr55-201 ENSMUSG00000042660 10090 + 18:36760239-36763708 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049323
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049323 10.037±3.41 8.188±0.95 12.805±0.23 11.023±3.49 6.648±1.64 7.038±1.52 4.468±0.42 14.264±1.80 21.715±18.86 6.511±0.44 8.088±0.39 12.177±3.99 13.374±5.95 5.345±1.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZH CIL_0006ZH_0002 CGP 18:36744656-36763708
CIL_0006ZK CIL_0006ZK_0002 CGP 18:36760239-36766214

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005730 IMP nucleolus
GO:0005737 IMP cytoplasm
GO:0006364 IMP rRNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358337 WDR55-001 protein_coding Homo_sapiens 0 1057
ENST00000504897 WDR55-004 nonsense_mediated_decay Homo_sapiens 0 924
ENST00000506393 WDR55-003 nonsense_mediated_decay Homo_sapiens 0 342
ENST00000511232 WDR55-002 retained_intron Homo_sapiens 0 815

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