C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: expressed sequence C87436
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050497 C87436-001 ENSMUSG00000046679 10090 + 6:86438374-86470388 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050497
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050497 2.482±1.09 4.084±0.65 2.157±0.49 2.662±1.11 1.913±0.67 1.477±0.44 3.109±0.81 1.663±0.81 2.318±0.75 1.103±0.25 4.276±2.08 1.508±0.60 15.583±3.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089T CIL_00089T_0002 VISTA 6:86179085-86780169

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264434 C2orf42-001 protein_coding Homo_sapiens 0 2058
ENST00000417203 C2orf42-007 protein_coding Homo_sapiens 3e-36 156
ENST00000417865 C2orf42-006 protein_coding Homo_sapiens 0 619
ENST00000419381 C2orf42-014 protein_coding Homo_sapiens 0 484
ENST00000420306 C2orf42-002 protein_coding Homo_sapiens 0 2010
ENST00000425268 C2orf42-011 protein_coding Homo_sapiens 0 298
ENST00000428010 C2orf42-005 protein_coding Homo_sapiens 0 302
ENST00000428751 C2orf42-008 protein_coding Homo_sapiens 0 200
ENST00000447804 C2orf42-004 protein_coding Homo_sapiens 0 638
ENST00000457952 C2orf42-012 protein_coding Homo_sapiens 0 484
ENST00000470096 C2orf42-015 processed_transcript Homo_sapiens 0 453

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