C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 5815
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050706 Gm5815-201 ENSMUSG00000046952 10090 + 17:58593659-58594843 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000050706
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000050706 0.376±0.27 1.020±0.30 0.078±0.06 0.174±0.12 0.773±0.19 1.674±0.64 0.420±0.06 0.532±0.10 0.337±0.30 1.072±0.24 0.637±0.44 0.042±0.00 13.173±0.90

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223145 GLCCI1-001 protein_coding Homo_sapiens 0 1561
ENST00000414914 GLCCI1-008 protein_coding Homo_sapiens 0 390
ENST00000430798 GLCCI1-009 protein_coding Homo_sapiens 0 429
ENST00000438949 GLCCI1-010 nonsense_mediated_decay Homo_sapiens 0 749
ENST00000460897 GLCCI1-006 retained_intron Homo_sapiens 0 207
ENST00000468567 RPA3OS-005 processed_transcript Homo_sapiens 0 207
ENST00000469183 RPA3OS-002 processed_transcript Homo_sapiens 0 200
ENST00000470583 GLCCI1-004 processed_transcript Homo_sapiens 0 610
ENST00000474269 GLCCI1-005 processed_transcript Homo_sapiens 0 377
ENST00000482540 GLCCI1-002 retained_intron Homo_sapiens 0 468
ENST00000489405 GLCCI1-003 retained_intron Homo_sapiens 0 907
ENST00000491947 GLCCI1-012 retained_intron Homo_sapiens 0 294
ENST00000492797 GLCCI1-007 retained_intron Homo_sapiens 0 307
ENST00000496617 GLCCI1-011 processed_transcript Homo_sapiens 0 488

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