C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: glucocorticoid induced transcript 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000489405 GLCCI1-003 ENSG00000106415 9606 + 7:8003897-8086939 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonMuscleENST00000489405
Transcript ID Colon Muscle
ENST00000489405 4.012±0.00 1.582±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002V7 CIL_0002V7_0001 CGP 7:7636518-8004059
CIL_0002V6 CIL_0002V6_0001 CGP 7:7640711-8094272
CIL_0002EL CIL_0002EL_0001 CGP 7:7968794-8262687

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161494 Glcci1-012 protein_coding Mus_musculus 0 961
ENSMUST00000064285 Glcci1-001 protein_coding Mus_musculus 0 957
ENSMUST00000162564 Gm16039-004 nonsense_mediated_decay Mus_musculus 0 957
ENSMUST00000161217 Glcci1-007 protein_coding Mus_musculus 0 913
ENSMUST00000050706 Gm5815-201 processed_pseudogene Mus_musculus 0 907
ENSMUST00000162567 Glcci1-006 protein_coding Mus_musculus 0 905
ENSMUST00000162383 Glcci1-009 protein_coding Mus_musculus 0 514
ENSMUST00000162206 Glcci1-010 processed_transcript Mus_musculus 0 274

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