C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glucocorticoid induced transcript 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482540 GLCCI1-002 ENSG00000106415 9606 + 7:8070075-8089077 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLiverLungOvaryENST00000482540
Transcript ID Bladder Breast Colon Kidney Liver Lung Ovary
ENST00000482540 1.281±0.00 1.512±0.00 1.545±0.00 0.998±0.00 0.781±0.00 2.968±0.00 1.482±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002V7 CIL_0002V7_0001 CGP 7:7636518-8004059
CIL_0002V6 CIL_0002V6_0001 CGP 7:7640711-8094272
CIL_0002EL CIL_0002EL_0001 CGP 7:7968794-8262687

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161494 Glcci1-012 protein_coding Mus_musculus 0 1574
ENSMUST00000064285 Glcci1-001 protein_coding Mus_musculus 0 1570
ENSMUST00000162564 Gm16039-004 nonsense_mediated_decay Mus_musculus 0 1570
ENSMUST00000162567 Glcci1-006 protein_coding Mus_musculus 0 905
ENSMUST00000161217 Glcci1-007 protein_coding Mus_musculus 0 737
ENSMUST00000050706 Gm5815-201 processed_pseudogene Mus_musculus 0 468
ENSMUST00000162206 Glcci1-010 processed_transcript Mus_musculus 0 274

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