C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glucocorticoid induced transcript 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000223145 GLCCI1-001 ENSG00000106415 9606 + 7:7968794-8089080 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartLiverLungOvaryPlacentaTestisENST00000223145
Transcript ID Adrenal Brain Breast Heart Liver Lung Ovary Placenta Testis
ENST00000223145 1.960±0.00 2.477±0.71 3.978±0.00 0.592±0.00 0.846±0.00 1.679±0.00 1.652±0.04 1.153±0.22 10.199±3.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002V7 CIL_0002V7_0001 CGP 7:7636518-8004059
CIL_0002V6 CIL_0002V6_0001 CGP 7:7640711-8094272
CIL_0002EL CIL_0002EL_0001 CGP 7:7968794-8262687

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064285 Glcci1-001 protein_coding Mus_musculus 0 3192
ENSMUST00000162564 Gm16039-004 nonsense_mediated_decay Mus_musculus 0 2682
ENSMUST00000162567 Glcci1-006 protein_coding Mus_musculus 0 2036
ENSMUST00000161217 Glcci1-007 protein_coding Mus_musculus 0 1849
ENSMUST00000161494 Glcci1-012 protein_coding Mus_musculus 0 1570
ENSMUST00000050706 Gm5815-201 processed_pseudogene Mus_musculus 0 1561
ENSMUST00000162383 Glcci1-009 protein_coding Mus_musculus 0 499
ENSMUST00000162206 Glcci1-010 processed_transcript Mus_musculus 0 427

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