C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: formin-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050719 Fmnl2-202 ENSMUSG00000036053 10090 + 2:52857868-53131878 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000050719
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000050719 0.629±0.15 2.148±0.42 1.561±0.00 2.360±0.00 1.382±0.35 0.648±0.00 0.560±0.11 1.233±0.33 0.343±0.09 2.631±0.29 9.142±3.72 3.778±3.44 0.532±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E6 CIL_0007E6_0002 CGP 2:52691664-53134202
CIL_0007E5 CIL_0007E5_0002 CGP 2:52857860-53191284

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005575 ND cellular_component
GO:0017048 IEA Rho GTPase binding
GO:0022604 IEA regulation of cell morphogenesis
GO:0030036 IEA actin cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000138015 fmnl2a-002 protein_coding Danio_rerio 0 826
ENSDART00000016814 fmnl2a-001 protein_coding Danio_rerio 0 826
ENSDART00000112883 fmnl2b-201 protein_coding Danio_rerio 0 627
ENST00000288670 FMNL2-001 protein_coding Homo_sapiens 0 2287
ENST00000475377 FMNL2-002 protein_coding Homo_sapiens 0 1751
ENST00000492942 FMNL2-007 retained_intron Homo_sapiens 0 370
ENST00000497192 FMNL2-009 processed_transcript Homo_sapiens 0 429

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