C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: formin-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000288670 FMNL2-001 ENSG00000157827 9606 + 2:152335237-152649834 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000288670
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000288670 4.967±0.00 1.860±0.00 2.154±0.00 27.141±8.62 5.974±1.34 5.062±0.00 1.750±0.00 3.448±2.16 2.500±1.74 6.352±5.05 1.134±0.46 5.673±3.09 3.197±1.21 3.210±0.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E6 CIL_0007E6_0001 CGP 2:152116801-152649834
CIL_0007E5 CIL_0007E5_0001 CGP 2:152335237-152717997

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005488 IEA binding
GO:0005737 IEA cytoplasm
GO:0007010 IMP cytoskeleton organization
GO:0016043 IEA cellular component organization
GO:0017048 IEA Rho GTPase binding
GO:0022604 IMP regulation of cell morphogenesis
GO:0030036 IEA actin cytoskeleton organization
GO:0030866 IMP cortical actin cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090952 Fmnl2-001 protein_coding Mus_musculus 0 4355
ENSMUST00000049483 Fmnl2-201 protein_coding Mus_musculus 0 4196
ENSMUST00000050719 Fmnl2-202 protein_coding Mus_musculus 0 2287
ENSMUST00000127122 Fmnl2-002 protein_coding Mus_musculus 0 1746
ENSMUST00000155586 Fmnl2-004 protein_coding Mus_musculus 0 839
ENSMUST00000134459 Fmnl2-003 protein_coding Mus_musculus 0 340

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