C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007E5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000157827-ENSG00000196504 CGP 9606 2:152335237-152717997
GeneTranscriptPositionBiotype
ENSG00000157827 (FMNL2)
formin-like 2
ENST00000288670 (FMNL2-001) 152335237-152649834 protein_coding
ENST00000475377 (FMNL2-002) 152619578-152649823 protein_coding
ENST00000492942 (FMNL2-007) 152578621-152607653 retained_intron
ENST00000497192 (FMNL2-009) 152625148-152626704 processed_transcript
ENSG00000177917 (ARL6IP6)
ADP-ribosylation factor-like 6 interacting protein 6
ENST00000326446 (ARL6IP6-001) 152717914-152761253 protein_coding
ENST00000425034 (ARL6IP6-004) 152718959-152759851 nonsense_mediated_decay
ENST00000455875 (ARL6IP6-003) 152718919-152759882 nonsense_mediated_decay
ENST00000463690 (ARL6IP6-005) 152720167-152760595 processed_transcript
ENST00000495469 (ARL6IP6-002) 152717893-152760764 processed_transcript
ENSG00000213197 (AC012066.1)
ENST00000439252 (AC012066.1-001) 152389937-152390630 processed_pseudogene
ENSG00000270776 (RP11-17G11.1)
ENST00000605605 (RP11-17G11.1-001) 152539197-152539427 processed_pseudogene
CIL_0007E5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036053-ENSMUSG00000061136 CGP 10090 2:52857860-53191284
GeneTranscriptPositionBiotype
ENSMUSG00000036053 (Fmnl2)
formin-like 2
ENSMUST00000049483 (Fmnl2-201) 52857868-53134202 protein_coding
ENSMUST00000050719 (Fmnl2-202) 52857868-53131878 protein_coding
ENSMUST00000090952 (Fmnl2-001) 52857860-53133804 protein_coding
ENSMUST00000127122 (Fmnl2-002) 53114115-53133804 protein_coding
ENSMUST00000134459 (Fmnl2-003) 53126022-53132203 protein_coding
ENSMUST00000155586 (Fmnl2-004) 53119963-53133804 protein_coding
ENSMUSG00000061136 (Prpf40a)
PRP40 pre-mRNA processing factor 40 homolog A (yeast)
ENSMUST00000076313 (Prpf40a-001) 53134704-53191225 protein_coding
ENSMUST00000125243 (Prpf40a-002) 53153044-53191284 protein_coding
ENSMUST00000132031 (Prpf40a-004) 53176168-53191225 processed_transcript
ENSMUST00000133384 (Prpf40a-005) 53139172-53145309 processed_transcript
ENSMUST00000152922 (Prpf40a-003) 53172394-53191204 processed_transcript
ENSMUSG00000097857 (Gm26603)
predicted gene, 26603
ENSMUST00000181380 (Gm26603-201) 52859723-52863516 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007E5_0001ENSG00000157827ENST00000288670ENST00000475377ENST00000492942ENST00000497192ENSG00000177917ENST00000326446ENST00000425034ENST00000455875ENST00000463690ENST00000495469ENSG00000213197ENST00000439252ENSG00000270776ENST00000605605CIL_0007E5_0002ENSMUSG00000036053ENSMUST00000049483ENSMUST00000050719ENSMUST00000090952ENSMUST00000127122ENSMUST00000134459ENSMUST00000155586ENSMUSG00000061136ENSMUST00000076313ENSMUST00000125243ENSMUST00000132031ENSMUST00000133384ENSMUST00000152922ENSMUSG00000097857ENSMUST00000181380
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007E5_0001ENSG00000157827ENST00000288670ENST00000475377ENSG00000177917ENST00000326446ENST00000495469ENSG00000213197ENST00000439252ENSG00000270776ENST00000605605CIL_0007E5_0002ENSMUSG00000036053ENSMUST00000049483ENSMUST00000050719ENSMUST00000090952ENSMUST00000127122ENSMUST00000155586ENSMUSG00000061136ENSMUST00000076313ENSMUST00000125243ENSMUST00000132031ENSMUST00000133384ENSMUSG00000097857ENSMUST00000181380
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000157827 ENST00000288670 4.967±0.00 1.860±0.00 2.154±0.00 27.141±8.62 5.974±1.34 5.062±0.00 1.750±0.00 3.448±2.16 2.500±1.74 6.352±5.05 1.134±0.46 5.673±3.09 3.197±1.21 3.210±0.53
ENST00000475377 N/A 0.507±0.00 N/A N/A 2.733±0.00 1.724±0.00 N/A N/A 0.404±0.00 2.837±0.00 N/A 2.713±0.18 N/A 2.375±0.00
ENST00000492942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177917 ENST00000326446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.137±0.47 N/A
ENST00000425034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495469 N/A N/A N/A N/A 5.141±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213197 ENST00000439252 0.024±0.00 0.132±0.00 1.185±0.00 0.988±0.18 1.232±0.98 0.326±0.28 0.168±0.14 0.166±0.00 2.268±0.00 2.329±0.00 0.357±0.31 1.154±1.45 0.047±0.00 0.106±0.04
ENSG00000270776 ENST00000605605 N/A N/A N/A N/A N/A N/A N/A N/A 0.425±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036053 ENSMUST00000049483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.292±0.00 0.223±0.00 0.070±0.00
ENSMUST00000050719 0.629±0.15 2.148±0.42 1.561±0.00 2.360±0.00 1.382±0.35 0.648±0.00 0.560±0.11 1.233±0.33 0.343±0.09 2.631±0.29 N/A 9.142±3.72 3.778±3.44 0.532±0.30
ENSMUST00000090952 0.471±0.00 N/A 3.267±0.82 9.839±6.36 0.261±0.00 0.496±0.07 0.266±0.05 0.341±0.04 0.336±0.12 0.823±0.22 0.793±0.33 5.552±0.00 1.330±0.85 N/A
ENSMUST00000127122 0.901±0.17 N/A 4.183±0.75 6.896±1.05 1.532±0.31 N/A 0.437±0.03 0.944±0.22 0.551±0.22 2.380±0.00 0.614±0.19 8.579±3.04 1.816±0.93 0.423±0.10
ENSMUST00000134459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155586 0.593±0.00 N/A 5.697±1.37 12.977±2.95 0.704±0.00 N/A 0.358±0.11 0.941±0.26 0.806±0.41 N/A 0.653±0.18 6.114±0.00 3.060±1.71 0.333±0.03
ENSMUSG00000061136 ENSMUST00000076313 1.579±0.43 N/A 5.087±0.04 8.412±3.75 1.338±0.21 1.110±0.20 0.940±0.15 1.072±0.41 4.162±3.53 1.651±0.26 2.474±0.38 9.630±0.72 6.310±1.37 2.289±0.43
ENSMUST00000125243 7.645±1.91 14.047±2.83 N/A 5.855±0.00 9.654±0.71 7.547±1.95 3.484±0.35 4.708±0.93 5.467±0.90 8.458±0.91 N/A 21.195±4.91 10.760±4.26 18.754±2.62
ENSMUST00000132031 4.504±1.08 9.954±1.95 N/A N/A 7.390±1.24 7.684±1.34 N/A 3.123±0.65 2.658±0.39 6.040±1.21 N/A 12.283±2.43 N/A N/A
ENSMUST00000133384 N/A N/A N/A 43.993±0.00 N/A N/A N/A N/A N/A N/A N/A 84.613±45.02 93.149±79.95 146.455±0.00
ENSMUST00000152922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097857 ENSMUST00000181380 0.028±0.01 0.075±0.00 N/A 0.030±0.00 0.091±0.06 0.057±0.03 0.054±0.06 0.057±0.03 0.022±0.01 0.203±0.06 0.015±0.00 0.225±0.15 0.080±0.08 0.019±0.00

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