C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007E6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115145-ENSG00000157827 CGP 9606 2:152116801-152649834
GeneTranscriptPositionBiotype
ENSG00000115145 (STAM2)
signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 		ENST00000263904 (STAM2-001) 152116801-152175992 protein_coding
ENST00000463854 (STAM2-002) 152131882-152175749 retained_intron
ENST00000465460 (STAM2-006) 152143897-152150206 processed_transcript
ENST00000482997 (STAM2-004) 152126004-152175729 retained_intron
ENST00000489389 (STAM2-003) 152120432-152124686 retained_intron
ENST00000494589 (STAM2-005) 152143989-152175741 retained_intron
ENSG00000157827 (FMNL2)
formin-like 2 		ENST00000288670 (FMNL2-001) 152335237-152649834 protein_coding
ENST00000475377 (FMNL2-002) 152619578-152649823 protein_coding
ENST00000492942 (FMNL2-007) 152578621-152607653 retained_intron
ENST00000497192 (FMNL2-009) 152625148-152626704 processed_transcript
ENSG00000213197 (AC012066.1)
 ENST00000439252 (AC012066.1-001) 152389937-152390630 processed_pseudogene
ENSG00000234272 (RPL30P2)
ribosomal protein L30 pseudogene 2 		ENST00000414021 (RPL30P2-001) 152131555-152131845 processed_pseudogene
ENSG00000270776 (RP11-17G11.1)
 ENST00000605605 (RP11-17G11.1-001) 152539197-152539427 processed_pseudogene
CIL_0007E6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000055371-ENSMUSG00000036053 CGP 10090 2:52691664-53134202
GeneTranscriptPositionBiotype
ENSMUSG00000036053 (Fmnl2)
formin-like 2 		ENSMUST00000049483 (Fmnl2-201) 52857868-53134202 protein_coding
ENSMUST00000050719 (Fmnl2-202) 52857868-53131878 protein_coding
ENSMUST00000090952 (Fmnl2-001) 52857860-53133804 protein_coding
ENSMUST00000127122 (Fmnl2-002) 53114115-53133804 protein_coding
ENSMUST00000134459 (Fmnl2-003) 53126022-53132203 protein_coding
ENSMUST00000155586 (Fmnl2-004) 53119963-53133804 protein_coding
ENSMUSG00000055371 (Stam2)
signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 		ENSMUST00000102759 (Stam2-001) 52691664-52742200 protein_coding
ENSMUST00000127316 (Stam2-002) 52699502-52742281 protein_coding
ENSMUST00000138290 (Stam2-004) 52719714-52742156 protein_coding
ENSMUST00000150582 (Stam2-003) 52709397-52742180 retained_intron
ENSMUST00000155516 (Stam2-005) 52709679-52742190 nonsense_mediated_decay
ENSMUSG00000097857 (Gm26603)
predicted gene, 26603 		ENSMUST00000181380 (Gm26603-201) 52859723-52863516 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007E6_0001ENSG00000115145ENST00000263904ENST00000463854ENST00000465460ENST00000482997ENST00000489389ENST00000494589ENSG00000157827ENST00000288670ENST00000475377ENST00000492942ENST00000497192ENSG00000213197ENST00000439252ENSG00000234272ENST00000414021ENSG00000270776ENST00000605605CIL_0007E6_0002ENSMUSG00000036053ENSMUST00000049483ENSMUST00000050719ENSMUST00000090952ENSMUST00000127122ENSMUST00000134459ENSMUST00000155586ENSMUSG00000055371ENSMUST00000102759ENSMUST00000127316ENSMUST00000138290ENSMUST00000150582ENSMUST00000155516ENSMUSG00000097857ENSMUST00000181380
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007E6_0001ENSG00000115145ENST00000263904ENST00000463854ENST00000482997ENST00000494589ENSG00000157827ENST00000288670ENST00000475377ENSG00000213197ENST00000439252ENSG00000234272ENST00000414021ENSG00000270776ENST00000605605CIL_0007E6_0002ENSMUSG00000036053ENSMUST00000049483ENSMUST00000050719ENSMUST00000090952ENSMUST00000127122ENSMUST00000155586ENSMUSG00000055371ENSMUST00000102759ENSMUST00000127316ENSMUST00000150582ENSMUST00000155516ENSMUSG00000097857ENSMUST00000181380
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115145 ENST00000263904 4.514±0.00 2.142±0.00 2.110±0.00 1.838±0.74 3.374±0.33 3.436±0.76 2.522±0.56 2.918±0.35 2.722±2.41 2.677±2.29 1.883±0.80 3.430±1.44 2.410±0.20 5.102±0.80
ENST00000463854 N/A N/A 3.855±0.00 2.443±0.00 N/A 3.499±0.00 N/A N/A N/A N/A N/A 4.800±0.00 N/A N/A
ENST00000465460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482997 N/A N/A N/A 1.861±0.00 3.152±0.00 N/A 1.051±0.00 N/A 3.917±0.00 6.509±0.00 0.502±0.00 2.125±0.00 3.093±0.00 22.087±0.00
ENST00000489389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494589 N/A N/A N/A N/A N/A N/A N/A 5.876±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000157827 ENST00000288670 4.967±0.00 1.860±0.00 2.154±0.00 27.141±8.62 5.974±1.34 5.062±0.00 1.750±0.00 3.448±2.16 2.500±1.74 6.352±5.05 1.134±0.46 5.673±3.09 3.197±1.21 3.210±0.53
ENST00000475377 N/A 0.507±0.00 N/A N/A 2.733±0.00 1.724±0.00 N/A N/A 0.404±0.00 2.837±0.00 N/A 2.713±0.18 N/A 2.375±0.00
ENST00000492942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213197 ENST00000439252 0.024±0.00 0.132±0.00 1.185±0.00 0.988±0.18 1.232±0.98 0.326±0.28 0.168±0.14 0.166±0.00 2.268±0.00 2.329±0.00 0.357±0.31 1.154±1.45 0.047±0.00 0.106±0.04
ENSG00000234272 ENST00000414021 0.088±0.00 0.228±0.00 N/A 0.090±0.00 N/A 0.166±0.00 0.832±0.67 0.953±0.64 N/A N/A N/A N/A N/A 0.055±0.01
ENSG00000270776 ENST00000605605 N/A N/A N/A N/A N/A N/A N/A N/A 0.425±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036053 ENSMUST00000049483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.292±0.00 0.223±0.00 0.070±0.00
ENSMUST00000050719 0.629±0.15 2.148±0.42 1.561±0.00 2.360±0.00 1.382±0.35 0.648±0.00 0.560±0.11 1.233±0.33 0.343±0.09 2.631±0.29 N/A 9.142±3.72 3.778±3.44 0.532±0.30
ENSMUST00000090952 0.471±0.00 N/A 3.267±0.82 9.839±6.36 0.261±0.00 0.496±0.07 0.266±0.05 0.341±0.04 0.336±0.12 0.823±0.22 0.793±0.33 5.552±0.00 1.330±0.85 N/A
ENSMUST00000127122 0.901±0.17 N/A 4.183±0.75 6.896±1.05 1.532±0.31 N/A 0.437±0.03 0.944±0.22 0.551±0.22 2.380±0.00 0.614±0.19 8.579±3.04 1.816±0.93 0.423±0.10
ENSMUST00000134459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155586 0.593±0.00 N/A 5.697±1.37 12.977±2.95 0.704±0.00 N/A 0.358±0.11 0.941±0.26 0.806±0.41 N/A 0.653±0.18 6.114±0.00 3.060±1.71 0.333±0.03
ENSMUSG00000055371 ENSMUST00000102759 7.257±1.75 11.665±1.56 2.389±0.18 6.634±2.99 5.538±1.51 13.133±1.23 1.977±1.58 4.845±1.82 2.880±0.72 7.917±0.18 1.557±0.52 9.679±3.22 5.576±2.15 7.425±2.79
ENSMUST00000127316 N/A N/A N/A 2.473±0.00 N/A N/A N/A N/A N/A N/A N/A 3.280±0.00 8.647±1.07 8.112±4.86
ENSMUST00000138290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.717±0.00 6.481±2.30 11.304±0.00
ENSMUST00000155516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.605±0.00 N/A
ENSMUSG00000097857 ENSMUST00000181380 0.028±0.01 0.075±0.00 N/A 0.030±0.00 0.091±0.06 0.057±0.03 0.054±0.06 0.057±0.03 0.022±0.01 0.203±0.06 0.015±0.00 0.225±0.15 0.080±0.08 0.019±0.00

Loading