C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: purine-rich element binding protein B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395699 PURB-001 ENSG00000146676 9606 - 7:44876293-44885361 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000395699
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000395699 6.875±0.00 6.237±0.00 7.708±2.56 4.477±0.00 5.612±1.12 2.766±1.39 3.857±1.57 3.358±2.11 5.582±0.12 3.971±0.00 5.061±0.58 4.709±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BS CIL_0007BS_0002 CGP 7:44826791-44885361
CIL_0000SE CIL_0000SE_0001 CGP 7:44876293-44979098

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003690 IEA double-stranded DNA binding
GO:0003697 ISS single-stranded DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003723 IEA RNA binding
GO:0003729 ISS mRNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005662 ISS DNA replication factor A complex
GO:0006351 IEA transcription, DNA-templated
GO:0008134 ISS transcription factor binding
GO:0044822 IDA poly(A) RNA binding
GO:0045637 NAS regulation of myeloid cell differentiation
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0046332 IEA SMAD binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179343 Purb-001 protein_coding Mus_musculus 0 5020
ENSMUST00000051301 Pura-001 protein_coding Mus_musculus 0 387

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