C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box and leucine-rich repeat protein 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000051358 Fbxl13-001 ENSMUSG00000048520 10090 - 5:21483847-21645605 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartLiverLungOvaryTestisENSMUST00000051358
Transcript ID Adrenal Heart Liver Lung Ovary Testis
ENSMUST00000051358 0.202±0.00 0.285±0.00 0.070±0.03 1.069±0.27 1.982±0.33 21.394±9.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y6 CIL_0007Y6_0002 VISTA 5:21195900-21797355
CIL_0005CF CIL_0005CF_0002 CGP 5:21424958-21645605
CIL_0005CK CIL_0005CK_0002 CGP 5:21483847-21645605

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000249377 LRRC17-001 protein_coding Homo_sapiens 1e-19 102
ENST00000313221 FBXL13-001 protein_coding Homo_sapiens 0 455
ENST00000339431 LRRC17-002 protein_coding Homo_sapiens 1e-19 102
ENST00000379305 FBXL13-003 protein_coding Homo_sapiens 0 455
ENST00000379308 FBXL13-201 protein_coding Homo_sapiens 0 660
ENST00000436908 FBXL13-006 protein_coding Homo_sapiens 0 455
ENST00000448002 FBXL13-002 nonsense_mediated_decay Homo_sapiens 0 660
ENST00000455112 FBXL13-005 protein_coding Homo_sapiens 0 455
ENST00000456695 FBXL13-007 protein_coding Homo_sapiens 0 453
ENST00000477915 FBXL13-010 processed_transcript Homo_sapiens 0 305
ENST00000498487 LRRC17-003 processed_transcript Homo_sapiens 3e-20 102

Loading