C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000051419  |
Sema6d-006 |
ENSMUSG00000027200 |
10090 | + |
2:124610296-124665957  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004NB | CIL_0004NB_0002 | CGP | 2:124089969-125088677 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004872 | IEA | receptor activity |
| GO:0005515 | IPI | protein binding |
| GO:0005886 | IEA | plasma membrane |
| GO:0014911 | IDA | positive regulation of smooth muscle cell migration |
| GO:0014912 | IDA | negative regulation of smooth muscle cell migration |
| GO:0016021 | IEA | integral component of membrane |
| GO:0021591 | IDA | ventricular system development |
| GO:0030154 | IEA | cell differentiation |
| GO:0030215 | IPI | semaphorin receptor binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000136361
|
sema6d-001 | protein_coding | Danio_rerio | 0 | 219 |
|
ENST00000316364
|
SEMA6D-004 | protein_coding | Homo_sapiens | 0 | 2170 |
|
ENST00000354744
|
SEMA6D-005 | protein_coding | Homo_sapiens | 0 | 2170 |
|
ENST00000355997
|
SEMA6D-201 | protein_coding | Homo_sapiens | 0 | 2170 |
|
ENST00000358066
|
SEMA6D-006 | protein_coding | Homo_sapiens | 0 | 4405 |
|
ENST00000389425
|
SEMA6D-003 | protein_coding | Homo_sapiens | 0 | 1877 |
|
ENST00000389428
|
SEMA6D-007 | protein_coding | Homo_sapiens | 0 | 2230 |
|
ENST00000536845
|
SEMA6D-002 | protein_coding | Homo_sapiens | 0 | 2043 |
|
ENST00000537942
|
SEMA6D-202 | protein_coding | Homo_sapiens | 0 | 4335 |
|
ENST00000558014
|
SEMA6D-001 | protein_coding | Homo_sapiens | 0 | 4335 |
|
ENST00000558816
|
SEMA6D-008 | protein_coding | Homo_sapiens | 0 | 2170 |
|
ENST00000559064
|
SEMA6D-015 | protein_coding | Homo_sapiens | 6e-28 | 128 |
|
ENST00000559196
|
SEMA6D-013 | protein_coding | Homo_sapiens | 0 | 835 |
|
ENST00000560006
|
SEMA6D-016 | protein_coding | Homo_sapiens | 0 | 339 |
|
ENST00000561133
|
SEMA6D-012 | protein_coding | Homo_sapiens | 0 | 553 |
