C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6863
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052882 Gm6863-201 ENSMUSG00000043483 10090 - 12:96922420-96923061 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052882
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052882 1.826±0.21 0.588±0.44 5.201±0.73 3.104±2.14 1.085±0.42 0.929±0.34 1.793±0.75 2.061±0.91 7.828±6.80 0.974±0.35 1.759±0.62 1.262±0.83 0.664±0.98 2.965±1.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JI CIL_0002JI_0002 CGP 12:95692226-98259459

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318548 NACAP2-001 processed_pseudogene Homo_sapiens 0 667
ENST00000356769 NACA-001 protein_coding Homo_sapiens 0 811
ENST00000359690 NACA3P-001 processed_pseudogene Homo_sapiens 0 723
ENST00000393891 NACA-003 protein_coding Homo_sapiens 0 811
ENST00000419462 NACAP1-001 processed_transcript Homo_sapiens 0 693
ENST00000454682 NACA-201 protein_coding Homo_sapiens 0 732
ENST00000519039 NACAP1-002 transcribed_processed_pseudogene Homo_sapiens 0 693
ENST00000521764 NACA2-001 protein_coding Homo_sapiens 0 678
ENST00000546392 NACA-005 protein_coding Homo_sapiens 0 811
ENST00000546410 NACA-017 retained_intron Homo_sapiens 0 333
ENST00000546862 NACA-012 protein_coding Homo_sapiens 0 492
ENST00000547914 NACA-015 nonsense_mediated_decay Homo_sapiens 0 521
ENST00000548084 NACA-013 nonsense_mediated_decay Homo_sapiens 9e-36 154
ENST00000548386 NACA-016 processed_transcript Homo_sapiens 0 392
ENST00000548563 NACA-011 protein_coding Homo_sapiens 0 749
ENST00000549259 NACA-007 protein_coding Homo_sapiens 0 723
ENST00000549855 NACA-020 protein_coding Homo_sapiens 0 453
ENST00000550920 NACA-018 protein_coding Homo_sapiens 0 734
ENST00000550952 NACA-004 protein_coding Homo_sapiens 0 732
ENST00000551520 NACA-009 retained_intron Homo_sapiens 4e-39 165
ENST00000551775 NACA-010 processed_transcript Homo_sapiens 0 248
ENST00000551793 NACA-008 processed_transcript Homo_sapiens 0 243
ENST00000552055 NACA-014 protein_coding Homo_sapiens 0 501
ENST00000552100 NACAP3-001 processed_pseudogene Homo_sapiens 0 536
ENST00000552540 NACA-002 protein_coding Homo_sapiens 0 811

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