C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002JI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185070-ENSG00000054983 CGP 9606 14:85530144-87993665
GeneTranscriptPositionBiotype
ENSG00000054983 (GALC)
galactosylceramidase 		ENST00000261304 (GALC-001) 87933014-87993271 protein_coding
ENST00000393568 (GALC-005) 87934681-87993178 protein_coding
ENST00000393569 (GALC-002) 87934331-87993665 protein_coding
ENST00000474294 (GALC-003) 87963272-87993154 retained_intron
ENST00000477716 (GALC-013) 87968393-87976864 retained_intron
ENST00000544807 (GALC-007) 87933723-87992838 protein_coding
ENST00000554372 (GALC-009) 87982205-87993172 nonsense_mediated_decay
ENST00000554916 (GALC-011) 87976358-87989647 processed_transcript
ENST00000555000 (GALC-008) 87837820-87980648 nonsense_mediated_decay
ENST00000555179 (GALC-014) 87934772-87949899 nonsense_mediated_decay
ENST00000555956 (GALC-015) 87987752-87988523 retained_intron
ENST00000556261 (GALC-012) 87981203-87988172 processed_transcript
ENST00000556879 (GALC-010) 87984441-87993122 nonsense_mediated_decay
ENST00000557316 (GALC-006) 87941395-87993170 nonsense_mediated_decay
ENST00000557520 (GALC-016) 87959553-87965623 processed_transcript
ENST00000622264 (GALC-017) 87963314-87993154 protein_coding
ENSG00000185070 (FLRT2)
fibronectin leucine rich transmembrane protein 2 		ENST00000330753 (FLRT2-001) 85530144-85654426 protein_coding
ENST00000553627 (FLRT2-006) 85560863-85562743 retained_intron
ENST00000553650 (FLRT2-007) 85623690-85626228 processed_transcript
ENST00000554746 (FLRT2-002) 85530228-85624087 protein_coding
ENST00000555398 (FLRT2-008) 85559309-85563050 processed_transcript
ENST00000556335 (FLRT2-004) 85530146-85552821 processed_transcript
ENST00000557419 (FLRT2-005) 85530163-85563052 processed_transcript
ENSG00000258733 (CTD-2341M24.1)
 ENST00000553668 (CTD-2341M24.1-002) 85983946-86129778 lincRNA
ENST00000554647 (CTD-2341M24.1-003) 86070754-86105054 lincRNA
ENST00000557195 (CTD-2341M24.1-001) 85934710-86128186 lincRNA
ENSG00000258770 (CTD-2007A10.1)
 ENST00000557784 (CTD-2007A10.1-001) 87634379-87655294 lincRNA
ENSG00000258804 (RP11-322L20.1)
 ENST00000557527 (RP11-322L20.1-001) 86905778-86922755 lincRNA
ENSG00000258807 (RP11-1152H15.1)
 ENST00000554305 (RP11-1152H15.1-001) 87710419-87872291 lincRNA
ENST00000554519 (RP11-1152H15.1-003) 87736402-87816251 lincRNA
ENST00000556168 (RP11-1152H15.1-002) 87725955-87734298 lincRNA
ENSG00000258859 (RP11-594C13.1)
 ENST00000557070 (RP11-594C13.1-001) 87353070-87573022 lincRNA
ENSG00000258912 (RP11-1079H9.1)
 ENST00000553346 (RP11-1079H9.1-001) 86014686-86062960 lincRNA
ENSG00000258958 (RP11-594C13.2)
 ENST00000555990 (RP11-594C13.2-001) 87323753-87332390 lincRNA
ENSG00000258994 (RP11-26L16.1)
 ENST00000553679 (RP11-26L16.1-001) 86332376-86401285 lincRNA
ENSG00000259028 (RP11-325D8.1)
 ENST00000554205 (RP11-325D8.1-001) 87568181-87569399 lincRNA
ENSG00000259096 (FAM35CP)
family with sequence similarity 35, member C, pseudogene 		ENST00000554755 (FAM35CP-001) 87952527-87955203 processed_pseudogene
CIL_0002JI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047414-ENSMUSG00000021003 CGP 10090 12:95692226-98259459
GeneTranscriptPositionBiotype
ENSMUSG00000021003 (Galc)
galactosylceramidase 		ENSMUST00000021390 (Galc-201) 98202304-98259459 protein_coding
ENSMUSG00000043483 (Gm6863)
predicted gene 6863 		ENSMUST00000052882 (Gm6863-201) 96922420-96923061 processed_pseudogene
ENSMUSG00000047414 (Flrt2)
fibronectin leucine rich transmembrane protein 2 		ENSMUST00000057324 (Flrt2-001) 95692226-95785215 protein_coding
ENSMUST00000110117 (Flrt2-002) 95695357-95781107 protein_coding
ENSMUSG00000059695 (1700019M22Rik)
RIKEN cDNA 1700019M22 gene 		ENSMUST00000073560 (1700019M22Rik-001) 96046767-96047120 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002JI_0001ENSG00000054983ENST00000261304ENST00000393568ENST00000393569ENST00000474294ENST00000477716ENST00000544807ENST00000554372ENST00000554916ENST00000555000ENST00000555179ENST00000555956ENST00000556261ENST00000556879ENST00000557316ENST00000557520ENST00000622264ENSG00000185070ENST00000330753ENST00000553627ENST00000553650ENST00000554746ENST00000555398ENST00000556335ENST00000557419ENSG00000258733ENST00000553668ENST00000554647ENST00000557195ENSG00000258770ENST00000557784ENSG00000258804ENST00000557527ENSG00000258807ENST00000554305ENST00000554519ENST00000556168ENSG00000258859ENST00000557070ENSG00000258912ENST00000553346ENSG00000258958ENST00000555990ENSG00000258994ENST00000553679ENSG00000259028ENST00000554205ENSG00000259096ENST00000554755CIL_0002JI_0002ENSMUSG00000021003ENSMUST00000021390ENSMUSG00000043483ENSMUST00000052882ENSMUSG00000047414ENSMUST00000057324ENSMUST00000110117ENSMUSG00000059695ENSMUST00000073560
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002JI_0001ENSG00000054983ENST00000261304ENST00000393568ENST00000393569ENST00000554916ENST00000555179ENST00000557316ENSG00000185070ENST00000330753ENST00000554746ENSG00000258733ENST00000553668ENST00000554647ENST00000557195ENSG00000258770ENST00000557784ENSG00000258804ENST00000557527ENSG00000258807ENST00000554305ENST00000554519ENST00000556168ENSG00000258859ENST00000557070ENSG00000258912ENST00000553346ENSG00000258958ENST00000555990ENSG00000258994ENST00000553679ENSG00000259028ENST00000554205ENSG00000259096ENST00000554755CIL_0002JI_0002ENSMUSG00000021003ENSMUST00000021390ENSMUSG00000043483ENSMUST00000052882ENSMUSG00000047414ENSMUST00000057324ENSMUST00000110117ENSMUSG00000059695ENSMUST00000073560
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000054983 ENST00000261304 5.451±0.00 1.871±0.00 1.943±0.00 9.114±4.79 2.901±0.47 2.336±1.35 3.183±2.05 6.645±0.00 1.555±0.05 7.090±2.43 0.860±0.00 3.636±1.43 4.452±1.48 3.868±0.00
ENST00000393568 N/A N/A N/A 1.951±0.00 2.280±0.00 0.875±0.00 N/A N/A 1.178±0.00 N/A N/A N/A N/A N/A
ENST00000393569 N/A N/A 0.944±0.00 N/A N/A N/A N/A N/A 0.702±0.00 N/A 1.539±0.00 1.835±0.00 N/A 1.910±0.00
ENST00000474294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554916 N/A N/A N/A N/A N/A N/A 4.207±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000555000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.436±0.00 N/A N/A N/A
ENST00000555956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557316 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.564±0.00 0.423±0.00 N/A N/A N/A
ENST00000557520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185070 ENST00000330753 0.265±0.00 0.965±0.00 0.126±0.00 1.868±0.00 0.388±0.16 0.393±0.00 0.065±0.01 0.178±0.07 0.281±0.24 0.292±0.14 0.170±0.07 1.499±0.61 0.086±0.08 1.268±0.80
ENST00000553627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554746 1.490±0.00 4.225±0.00 1.044±0.00 10.470±0.00 2.973±0.28 1.874±0.10 0.472±0.03 1.096±0.34 5.311±0.00 1.671±0.57 1.050±0.08 6.802±4.29 0.372±0.27 4.133±2.24
ENST00000555398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258733 ENST00000553668 0.037±0.00 N/A N/A 0.200±0.00 0.437±0.11 0.063±0.00 0.036±0.00 N/A 0.053±0.02 N/A 0.028±0.00 0.327±0.29 0.172±0.00 0.172±0.10
ENST00000554647 N/A N/A N/A N/A N/A N/A N/A N/A 0.441±0.00 N/A N/A N/A N/A 0.112±0.00
ENST00000557195 0.082±0.00 N/A N/A N/A N/A 0.025±0.00 0.082±0.04 0.090±0.00 N/A 0.496±0.00 N/A N/A 0.039±0.00 0.049±0.00
ENSG00000258770 ENST00000557784 N/A N/A 0.955±0.00 0.072±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.399±0.29
ENSG00000258804 ENST00000557527 0.041±0.00 0.009±0.00 N/A 0.018±0.00 N/A N/A N/A N/A 0.004±0.00 N/A 0.004±0.00 N/A N/A 0.193±0.03
ENSG00000258807 ENST00000554305 N/A N/A 0.056±0.00 N/A N/A N/A 0.133±0.00 N/A N/A N/A N/A N/A N/A 0.027±0.00
ENST00000554519 0.418±0.00 1.177±0.00 N/A 0.804±0.00 0.412±0.00 0.396±0.00 0.519±0.00 0.271±0.00 0.227±0.00 0.177±0.00 0.196±0.00 0.673±0.00 N/A 0.572±0.00
ENST00000556168 N/A 0.313±0.00 N/A 0.341±0.00 N/A N/A N/A 0.162±0.00 N/A 0.223±0.00 N/A N/A N/A 0.722±0.17
ENSG00000258859 ENST00000557070 N/A N/A N/A 0.183±0.00 0.025±0.00 N/A N/A N/A N/A 0.087±0.00 N/A 0.079±0.02 N/A 0.056±0.00
ENSG00000258912 ENST00000553346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.293±0.05
ENSG00000258958 ENST00000555990 N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.084±0.00
ENSG00000258994 ENST00000553679 N/A 0.148±0.00 N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259028 ENST00000554205 N/A N/A N/A N/A N/A 0.105±0.00 N/A N/A N/A N/A N/A N/A N/A 0.191±0.00
ENSG00000259096 ENST00000554755 0.004±0.00 0.028±0.00 N/A 0.040±0.00 0.068±0.06 0.165±0.00 0.015±0.00 N/A 0.050±0.00 0.236±0.00 0.003±0.00 0.503±0.00 N/A 0.012±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021003 ENSMUST00000021390 6.111±1.32 6.294±1.60 3.744±0.13 5.798±0.62 4.607±1.11 3.049±0.50 2.052±0.54 24.836±1.53 1.566±0.52 6.359±0.44 0.988±0.32 11.870±1.92 2.708±0.78 7.027±2.21
ENSMUSG00000043483 ENSMUST00000052882 1.826±0.21 0.588±0.44 5.201±0.73 3.104±2.14 1.085±0.42 0.929±0.34 1.793±0.75 2.061±0.91 7.828±6.80 0.974±0.35 1.759±0.62 1.262±0.83 0.664±0.98 2.965±1.43
ENSMUSG00000047414 ENSMUST00000057324 1.323±0.49 0.637±0.17 3.045±0.41 4.647±1.91 1.904±0.61 0.162±0.07 0.598±0.04 0.334±0.05 0.166±0.10 1.300±0.06 0.299±0.00 1.307±0.73 1.102±0.61 0.134±0.07
ENSMUST00000110117 2.943±1.36 0.555±0.18 N/A 2.232±0.23 2.343±1.21 0.425±0.08 0.695±0.14 0.549±0.22 0.049±0.03 1.296±0.09 N/A 2.109±0.62 0.562±0.17 0.912±0.41
ENSMUSG00000059695 ENSMUST00000073560 N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A N/A N/A N/A N/A N/A 171.713±202.40

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