C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002JI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185070-ENSG00000054983 CGP 9606 14:85530144-87993665
GeneTranscriptPositionBiotype
ENSG00000054983 (GALC)
galactosylceramidase 		ENST00000261304 (GALC-001) 87933014-87993271 protein_coding
ENST00000393568 (GALC-005) 87934681-87993178 protein_coding
ENST00000393569 (GALC-002) 87934331-87993665 protein_coding
ENST00000474294 (GALC-003) 87963272-87993154 retained_intron
ENST00000477716 (GALC-013) 87968393-87976864 retained_intron
ENST00000544807 (GALC-007) 87933723-87992838 protein_coding
ENST00000554372 (GALC-009) 87982205-87993172 nonsense_mediated_decay
ENST00000554916 (GALC-011) 87976358-87989647 processed_transcript
ENST00000555000 (GALC-008) 87837820-87980648 nonsense_mediated_decay
ENST00000555179 (GALC-014) 87934772-87949899 nonsense_mediated_decay
ENST00000555956 (GALC-015) 87987752-87988523 retained_intron
ENST00000556261 (GALC-012) 87981203-87988172 processed_transcript
ENST00000556879 (GALC-010) 87984441-87993122 nonsense_mediated_decay
ENST00000557316 (GALC-006) 87941395-87993170 nonsense_mediated_decay
ENST00000557520 (GALC-016) 87959553-87965623 processed_transcript
ENST00000622264 (GALC-017) 87963314-87993154 protein_coding
ENSG00000185070 (FLRT2)
fibronectin leucine rich transmembrane protein 2 		ENST00000330753 (FLRT2-001) 85530144-85654426 protein_coding
ENST00000553627 (FLRT2-006) 85560863-85562743 retained_intron
ENST00000553650 (FLRT2-007) 85623690-85626228 processed_transcript
ENST00000554746 (FLRT2-002) 85530228-85624087 protein_coding
ENST00000555398 (FLRT2-008) 85559309-85563050 processed_transcript
ENST00000556335 (FLRT2-004) 85530146-85552821 processed_transcript
ENST00000557419 (FLRT2-005) 85530163-85563052 processed_transcript
ENSG00000258733 (CTD-2341M24.1)
 ENST00000553668 (CTD-2341M24.1-002) 85983946-86129778 lincRNA
ENST00000554647 (CTD-2341M24.1-003) 86070754-86105054 lincRNA
ENST00000557195 (CTD-2341M24.1-001) 85934710-86128186 lincRNA
ENSG00000258770 (CTD-2007A10.1)
 ENST00000557784 (CTD-2007A10.1-001) 87634379-87655294 lincRNA
ENSG00000258804 (RP11-322L20.1)
 ENST00000557527 (RP11-322L20.1-001) 86905778-86922755 lincRNA
ENSG00000258807 (RP11-1152H15.1)
 ENST00000554305 (RP11-1152H15.1-001) 87710419-87872291 lincRNA
ENST00000554519 (RP11-1152H15.1-003) 87736402-87816251 lincRNA
ENST00000556168 (RP11-1152H15.1-002) 87725955-87734298 lincRNA
ENSG00000258859 (RP11-594C13.1)
 ENST00000557070 (RP11-594C13.1-001) 87353070-87573022 lincRNA
ENSG00000258912 (RP11-1079H9.1)
 ENST00000553346 (RP11-1079H9.1-001) 86014686-86062960 lincRNA
ENSG00000258958 (RP11-594C13.2)
 ENST00000555990 (RP11-594C13.2-001) 87323753-87332390 lincRNA
ENSG00000258994 (RP11-26L16.1)
 ENST00000553679 (RP11-26L16.1-001) 86332376-86401285 lincRNA
ENSG00000259028 (RP11-325D8.1)
 ENST00000554205 (RP11-325D8.1-001) 87568181-87569399 lincRNA
ENSG00000259096 (FAM35CP)
family with sequence similarity 35, member C, pseudogene 		ENST00000554755 (FAM35CP-001) 87952527-87955203 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0002JI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047414-ENSMUSG00000021003 CGP 10090 12:95692226-98259459
GeneTranscriptPositionBiotype
ENSMUSG00000021003 (Galc)
galactosylceramidase 		ENSMUST00000021390 (Galc-201) 98202304-98259459 protein_coding
ENSMUSG00000043483 (Gm6863)
predicted gene 6863 		ENSMUST00000052882 (Gm6863-201) 96922420-96923061 processed_pseudogene
ENSMUSG00000047414 (Flrt2)
fibronectin leucine rich transmembrane protein 2 		ENSMUST00000057324 (Flrt2-001) 95692226-95785215 protein_coding
ENSMUST00000110117 (Flrt2-002) 95695357-95781107 protein_coding
ENSMUSG00000059695 (1700019M22Rik)
RIKEN cDNA 1700019M22 gene 		ENSMUST00000073560 (1700019M22Rik-001) 96046767-96047120 processed_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002JI_0001ENSG00000054983ENST00000261304ENST00000393568ENST00000393569ENST00000474294ENST00000477716ENST00000544807ENST00000554372ENST00000554916ENST00000555000ENST00000555179ENST00000555956ENST00000556261ENST00000556879ENST00000557316ENST00000557520ENST00000622264ENSG00000185070ENST00000330753ENST00000553627ENST00000553650ENST00000554746ENST00000555398ENST00000556335ENST00000557419ENSG00000258733ENST00000553668ENST00000554647ENST00000557195ENSG00000258770ENST00000557784ENSG00000258804ENST00000557527ENSG00000258807ENST00000554305ENST00000554519ENST00000556168ENSG00000258859ENST00000557070ENSG00000258912ENST00000553346ENSG00000258958ENST00000555990ENSG00000258994ENST00000553679ENSG00000259028ENST00000554205ENSG00000259096ENST00000554755CIL_0002JI_0002ENSMUSG00000021003ENSMUST00000021390ENSMUSG00000043483ENSMUST00000052882ENSMUSG00000047414ENSMUST00000057324ENSMUST00000110117ENSMUSG00000059695ENSMUST00000073560
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002JI_0001ENSG00000054983ENST00000261304ENST00000393568ENST00000393569ENST00000554916ENST00000555179ENST00000557316ENSG00000185070ENST00000330753ENST00000554746ENSG00000258733ENST00000553668ENST00000554647ENST00000557195ENSG00000258770ENST00000557784ENSG00000258804ENST00000557527ENSG00000258807ENST00000554305ENST00000554519ENST00000556168ENSG00000258859ENST00000557070ENSG00000258912ENST00000553346ENSG00000258958ENST00000555990ENSG00000258994ENST00000553679ENSG00000259028ENST00000554205ENSG00000259096ENST00000554755CIL_0002JI_0002ENSMUSG00000021003ENSMUST00000021390ENSMUSG00000043483ENSMUST00000052882ENSMUSG00000047414ENSMUST00000057324ENSMUST00000110117ENSMUSG00000059695ENSMUST00000073560
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000054983 ENST00000261304 5.451±0.00 1.871±0.00 1.943±0.00 9.114±4.79 2.901±0.47 2.336±1.35 3.183±2.05 6.645±0.00 1.555±0.05 7.090±2.43 0.860±0.00 3.636±1.43 4.452±1.48 3.868±0.00
ENST00000393568 N/A N/A N/A 1.951±0.00 2.280±0.00 0.875±0.00 N/A N/A 1.178±0.00 N/A N/A N/A N/A N/A
ENST00000393569 N/A N/A 0.944±0.00 N/A N/A N/A N/A N/A 0.702±0.00 N/A 1.539±0.00 1.835±0.00 N/A 1.910±0.00
ENST00000474294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554916 N/A N/A N/A N/A N/A N/A 4.207±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000555000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.436±0.00 N/A N/A N/A
ENST00000555956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557316 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.564±0.00 0.423±0.00 N/A N/A N/A
ENST00000557520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185070 ENST00000330753 0.265±0.00 0.965±0.00 0.126±0.00 1.868±0.00 0.388±0.16 0.393±0.00 0.065±0.01 0.178±0.07 0.281±0.24 0.292±0.14 0.170±0.07 1.499±0.61 0.086±0.08 1.268±0.80
ENST00000553627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554746 1.490±0.00 4.225±0.00 1.044±0.00 10.470±0.00 2.973±0.28 1.874±0.10 0.472±0.03 1.096±0.34 5.311±0.00 1.671±0.57 1.050±0.08 6.802±4.29 0.372±0.27 4.133±2.24
ENST00000555398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258733 ENST00000553668 0.037±0.00 N/A N/A 0.200±0.00 0.437±0.11 0.063±0.00 0.036±0.00 N/A 0.053±0.02 N/A 0.028±0.00 0.327±0.29 0.172±0.00 0.172±0.10
ENST00000554647 N/A N/A N/A N/A N/A N/A N/A N/A 0.441±0.00 N/A N/A N/A N/A 0.112±0.00
ENST00000557195 0.082±0.00 N/A N/A N/A N/A 0.025±0.00 0.082±0.04 0.090±0.00 N/A 0.496±0.00 N/A N/A 0.039±0.00 0.049±0.00
ENSG00000258770 ENST00000557784 N/A N/A 0.955±0.00 0.072±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.399±0.29
ENSG00000258804 ENST00000557527 0.041±0.00 0.009±0.00 N/A 0.018±0.00 N/A N/A N/A N/A 0.004±0.00 N/A 0.004±0.00 N/A N/A 0.193±0.03
ENSG00000258807 ENST00000554305 N/A N/A 0.056±0.00 N/A N/A N/A 0.133±0.00 N/A N/A N/A N/A N/A N/A 0.027±0.00
ENST00000554519 0.418±0.00 1.177±0.00 N/A 0.804±0.00 0.412±0.00 0.396±0.00 0.519±0.00 0.271±0.00 0.227±0.00 0.177±0.00 0.196±0.00 0.673±0.00 N/A 0.572±0.00
ENST00000556168 N/A 0.313±0.00 N/A 0.341±0.00 N/A N/A N/A 0.162±0.00 N/A 0.223±0.00 N/A N/A N/A 0.722±0.17
ENSG00000258859 ENST00000557070 N/A N/A N/A 0.183±0.00 0.025±0.00 N/A N/A N/A N/A 0.087±0.00 N/A 0.079±0.02 N/A 0.056±0.00
ENSG00000258912 ENST00000553346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.293±0.05
ENSG00000258958 ENST00000555990 N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.084±0.00
ENSG00000258994 ENST00000553679 N/A 0.148±0.00 N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259028 ENST00000554205 N/A N/A N/A N/A N/A 0.105±0.00 N/A N/A N/A N/A N/A N/A N/A 0.191±0.00
ENSG00000259096 ENST00000554755 0.004±0.00 0.028±0.00 N/A 0.040±0.00 0.068±0.06 0.165±0.00 0.015±0.00 N/A 0.050±0.00 0.236±0.00 0.003±0.00 0.503±0.00 N/A 0.012±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021003 ENSMUST00000021390 6.111±1.32 6.294±1.60 3.744±0.13 5.798±0.62 4.607±1.11 3.049±0.50 2.052±0.54 24.836±1.53 1.566±0.52 6.359±0.44 0.988±0.32 11.870±1.92 2.708±0.78 7.027±2.21
ENSMUSG00000043483 ENSMUST00000052882 1.826±0.21 0.588±0.44 5.201±0.73 3.104±2.14 1.085±0.42 0.929±0.34 1.793±0.75 2.061±0.91 7.828±6.80 0.974±0.35 1.759±0.62 1.262±0.83 0.664±0.98 2.965±1.43
ENSMUSG00000047414 ENSMUST00000057324 1.323±0.49 0.637±0.17 3.045±0.41 4.647±1.91 1.904±0.61 0.162±0.07 0.598±0.04 0.334±0.05 0.166±0.10 1.300±0.06 0.299±0.00 1.307±0.73 1.102±0.61 0.134±0.07
ENSMUST00000110117 2.943±1.36 0.555±0.18 N/A 2.232±0.23 2.343±1.21 0.425±0.08 0.695±0.14 0.549±0.22 0.049±0.03 1.296±0.09 N/A 2.109±0.62 0.562±0.17 0.912±0.41
ENSMUSG00000059695 ENSMUST00000073560 N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A N/A N/A N/A N/A N/A 171.713±202.40

Loading