C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stonin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052969 Ston2-001 ENSMUSG00000020961 10090 - 12:91638542-91786436 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastLungOvaryTestisENSMUST00000052969
Transcript ID Adipose Adrenal Breast Lung Ovary Testis
ENSMUST00000052969 0.686±0.00 0.693±0.20 1.260±0.46 1.821±0.00 3.220±0.97 2.114±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087I CIL_00087I_0002 VISTA 12:91377577-91981083
CIL_0004TS CIL_0004TS_0002 CGP 12:91555916-91788387
CIL_0000TE CIL_0000TE_0002 CGP 12:91638542-91849157

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IMP hematopoietic progenitor cell differentiation
GO:0005515 IPI protein binding
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0006886 IEA intracellular protein transport
GO:0007268 IC synaptic transmission
GO:0008021 IDA synaptic vesicle
GO:0030054 IEA cell junction
GO:0030100 IDA regulation of endocytosis
GO:0030131 IEA clathrin adaptor complex
GO:0030136 IDA clathrin-coated vesicle
GO:0043005 IEA neuron projection
GO:0048488 ISS synaptic vesicle endocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267540 STON2-001 protein_coding Homo_sapiens 0 2798
ENST00000553821 STON2-008 protein_coding Homo_sapiens 0 401
ENST00000555284 STON2-004 retained_intron Homo_sapiens 0 2193
ENST00000555447 STON2-002 protein_coding Homo_sapiens 0 2795
ENST00000614646 STON2-201 protein_coding Homo_sapiens 0 2795

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