C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stonin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000555447 STON2-002 ENSG00000140022 9606 - 14:81260656-81427404 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyOvaryPlacentaTestisENST00000555447
Transcript ID Adipose Brain Breast Colon Heart Kidney Ovary Placenta Testis
ENST00000555447 0.728±0.00 3.023±0.00 0.727±0.00 0.221±0.00 0.109±0.00 1.561±0.00 0.635±0.21 0.101±0.00 0.315±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087I CIL_00087I_0001 VISTA 14:81013259-81617678
CIL_0004TS CIL_0004TS_0001 CGP 14:81175452-81436465
CIL_0000TE CIL_0000TE_0001 CGP 14:81260656-81533861

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IEA hematopoietic progenitor cell differentiation
GO:0005515 IPI:IEA protein binding
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006886 IEA intracellular protein transport
GO:0006897 IEA endocytosis
GO:0008021 IEA synaptic vesicle
GO:0016192 IEA vesicle-mediated transport
GO:0030054 IEA cell junction
GO:0030100 ISS regulation of endocytosis
GO:0030131 IEA clathrin adaptor complex
GO:0030136 IEA clathrin-coated vesicle
GO:0043005 IEA neuron projection
GO:0048488 IGI synaptic vesicle endocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164713 Ston2-003 protein_coding Mus_musculus 0 2795
ENSMUST00000052969 Ston2-001 protein_coding Mus_musculus 0 2795
ENSMUST00000170077 Ston2-006 protein_coding Mus_musculus 0 494

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