C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053183 Arf3-001 ENSMUSG00000051853 10090 - 15:98737621-98763211 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053183
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053183 34.834±10.08 62.735±7.63 46.231±1.39 88.877±39.28 36.230±14.16 44.546±21.30 7.762±2.39 41.128±10.12 16.227±4.26 78.797±17.50 3.757±0.87 75.315±26.35 22.517±9.08 32.356±17.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BO CIL_0002BO_0002 CGP 15:98724373-98763214
CIL_00000G CIL_00000G_0002 CGP 15:98737621-98778150

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 TAS GTP binding
GO:0005794 IDA Golgi apparatus
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 TAS protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256682 ARF3-001 protein_coding Homo_sapiens 0 1371
ENST00000272102 ARF1-001 protein_coding Homo_sapiens 0 534
ENST00000398092 RP11-302B13.5-001 protein_coding Homo_sapiens 0 671
ENST00000447318 ARF3-005 protein_coding Homo_sapiens 0 606
ENST00000469235 ARF1-010 processed_transcript Homo_sapiens 0 466
ENST00000470558 ARF1-006 processed_transcript Homo_sapiens 0 534
ENST00000470670 ARF1-003 processed_transcript Homo_sapiens 0 412
ENST00000478336 ARF1-007 processed_transcript Homo_sapiens 0 534
ENST00000478424 ARF1-004 processed_transcript Homo_sapiens 0 534
ENST00000485410 ARF3-003 processed_transcript Homo_sapiens 0 294
ENST00000497165 ARF1-011 processed_transcript Homo_sapiens 0 466
ENST00000537495 AC073610.5-001 protein_coding Homo_sapiens 0 248
ENST00000539611 ARF3-007 protein_coding Homo_sapiens 0 281
ENST00000540651 ARF1-201 protein_coding Homo_sapiens 0 534
ENST00000541182 ARF1-202 protein_coding Homo_sapiens 0 534
ENST00000541236 ARF3-010 protein_coding Homo_sapiens 0 501
ENST00000541959 ARF3-012 protein_coding Homo_sapiens 0 889
ENST00000545855 ARF3-011 protein_coding Homo_sapiens 0 237
ENST00000552027 RP11-340M11.1-001 processed_pseudogene Homo_sapiens 0 248

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