C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: rhomboid, veinlet-like 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372990 RHBDL2-201 ENSG00000158315 9606 - 1:38885807-38941784 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryTestisENST00000372990
Transcript ID Brain Ovary Testis
ENST00000372990 1.698±0.00 3.883±0.00 6.350±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PZ CIL_0008PZ_0001 VISTA 1:38426937-39028462
CIL_0008G7 CIL_0008G7_0001 VISTA 1:38483085-39084457
CIL_0007Q3 CIL_0007Q3_0001 VISTA 1:38525828-39126769
CIL_000990 CIL_000990_0001 VISTA 1:38863737-39466035

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IDA:IEA serine-type endopeptidase activity
GO:0005886 IDA plasma membrane
GO:0006508 IEA proteolysis
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053202 Rhbdl2-201 protein_coding Mus_musculus 0 1011
ENSMUST00000106204 Rhbdl2-001 protein_coding Mus_musculus 0 1011
ENSMUST00000148797 Rhbdl2-005 processed_transcript Mus_musculus 0 191

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