C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein, multitype 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053467 Zfpm2-201 ENSMUSG00000022306 10090 + 15:40655042-41104592 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053467
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053467 1.622±0.90 0.810±0.25 1.841±0.14 4.492±2.02 0.590±0.25 0.474±0.08 2.587±0.14 0.349±0.09 0.205±0.11 0.790±0.19 0.053±0.02 3.381±0.90 0.225±0.18 1.513±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OF CIL_0007OF_0002 UCNEbase 15:39904375-41104588
CIL_0008B6 CIL_0008B6_0002 VISTA 15:40054034-40656272
CIL_0008OP CIL_0008OP_0002 VISTA 15:40175259-40776782
CIL_0008UU CIL_0008UU_0002 VISTA 15:40357862-40959260
CIL_0008FS CIL_0008FS_0002 VISTA 15:40611362-41215891
CIL_0007R3 CIL_0007R3_0002 VISTA 15:40623867-41224925
CIL_00060E CIL_00060E_0002 CGP 15:40655042-41861048

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0001570 IDA vasculogenesis
GO:0001701 IMP in utero embryonic development
GO:0003148 IEA outflow tract septum morphogenesis
GO:0003151 TAS outflow tract morphogenesis
GO:0003181 TAS atrioventricular valve morphogenesis
GO:0003192 TAS mitral valve formation
GO:0003195 TAS tricuspid valve formation
GO:0003221 IEA right ventricular cardiac muscle tissue morphogenesis
GO:0003677 IEA DNA binding
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007507 IMP heart development
GO:0008134 IPI transcription factor binding
GO:0030324 IMP lung development
GO:0045599 IMP negative regulation of fat cell differentiation
GO:0045892 TAS negative regulation of transcription, DNA-templated
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0048568 IMP embryonic organ development
GO:0048738 IMP cardiac muscle tissue development
GO:0055008 TAS cardiac muscle tissue morphogenesis
GO:0060412 IEA ventricular septum morphogenesis
GO:0060548 IMP negative regulation of cell death
GO:0060979 TAS vasculogenesis involved in coronary vascular morphogenesis
GO:2000020 IMP positive regulation of male gonad development
GO:2000195 IMP negative regulation of female gonad development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000407775 ZFPM2-002 protein_coding Homo_sapiens 0 5866
ENST00000511341 ZFPM2-003 processed_transcript Homo_sapiens 0 865
ENST00000517361 ZFPM2-004 protein_coding Homo_sapiens 0 3999
ENST00000520492 ZFPM2-001 protein_coding Homo_sapiens 0 4680
ENST00000522296 ZFPM2-008 processed_transcript Homo_sapiens 0 3402

Loading