C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinaldehyde binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053718 Rlbp1-201 ENSMUSG00000039194 10090 - 7:79374871-79387027 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainLiverLungPlacentaTestisENSMUST00000053718
Transcript ID Adipose Adrenal Bladder Brain Liver Lung Placenta Testis
ENSMUST00000053718 0.013±0.00 0.051±0.01 0.021±0.00 4.421±1.53 0.042±0.03 0.177±0.01 0.564±0.33 0.117±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RB CIL_0002RB_0003 CGP 7:79273201-79387027
CIL_00011C CIL_00011C_0002 CGP 7:79374871-79450265

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005502 IDA 11-cis retinal binding
GO:0005737 IEA cytoplasm
GO:0006810 IEA transport
GO:0007601 IEA visual perception
GO:0019841 IEA retinol binding
GO:0044297 IEA cell body
GO:0050896 IEA response to stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268125 RLBP1-001 protein_coding Homo_sapiens 0 1194
ENST00000567787 RLBP1-002 nonsense_mediated_decay Homo_sapiens 0 411

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