C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinaldehyde binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000268125 RLBP1-001 ENSG00000140522 9606 - 15:89209869-89221751 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonOvaryTestisENST00000268125
Transcript ID Adipose Brain Colon Ovary Testis
ENST00000268125 0.015±0.00 0.983±0.00 0.113±0.00 0.042±0.00 0.213±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RB CIL_0002RB_0002 CGP 15:89087459-89221751
CIL_00011C CIL_00011C_0001 CGP 15:89209869-89317261

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001523 TAS retinoid metabolic process
GO:0005215 IEA transporter activity
GO:0005502 IEA 11-cis retinal binding
GO:0005575 ND cellular_component
GO:0005829 TAS cytosol
GO:0006776 TAS vitamin A metabolic process
GO:0006810 IEA transport
GO:0007601 IEA visual perception
GO:0007603 TAS phototransduction, visible light
GO:0019841 IEA retinol binding
GO:0044297 IEA cell body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053718 Rlbp1-201 protein_coding Mus_musculus 0 1194
ENSMUST00000179243 Rlbp1-202 protein_coding Mus_musculus 0 1075

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