C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002RB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000025797-ENSDARG00000012504 CGP 7955 7:14692163-14755905
GeneTranscriptPositionBiotype
ENSDARG00000012504 (rlbp1a)
retinaldehyde binding protein 1a 		ENSDART00000006897 (rlbp1a-201) 14739932-14755905 protein_coding
ENSDARG00000025797 (abhd2a)
abhydrolase domain containing 2a 		ENSDART00000035067 (abhd2a-201) 14692163-14730459 protein_coding
CIL_0002RB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140526-ENSG00000140522 CGP 9606 15:89087459-89221751
GeneTranscriptPositionBiotype
ENSG00000140522 (RLBP1)
retinaldehyde binding protein 1 		ENST00000268125 (RLBP1-001) 89209869-89221751 protein_coding
ENST00000563254 (RLBP1-005) 89210002-89211843 protein_coding
ENST00000564388 (RLBP1-004) 89219562-89221605 retained_intron
ENST00000567787 (RLBP1-002) 89210750-89221614 nonsense_mediated_decay
ENSG00000140526 (ABHD2)
abhydrolase domain containing 2 		ENST00000352732 (ABHD2-001) 89088150-89202360 protein_coding
ENST00000355100 (ABHD2-201) 89102441-89202360 protein_coding
ENST00000562073 (ABHD2-011) 89116504-89183373 processed_transcript
ENST00000562254 (ABHD2-009) 89088510-89094364 processed_transcript
ENST00000564876 (ABHD2-004) 89088422-89113816 processed_transcript
ENST00000565066 (ABHD2-006) 89088426-89151852 protein_coding
ENST00000565825 (ABHD2-008) 89088482-89113791 processed_transcript
ENST00000565973 (ABHD2-007) 89088430-89195751 protein_coding
ENST00000568308 (ABHD2-010) 89185415-89193453 retained_intron
ENST00000569411 (ABHD2-002) 89087459-89155390 protein_coding
ENST00000569550 (ABHD2-005) 89088422-89116494 protein_coding
ENSG00000259699 (HMGB1P8)
high mobility group box 1 pseudogene 8 		ENST00000558211 (HMGB1P8-001) 89135547-89136495 processed_pseudogene
ENSG00000259948 (RP11-326A19.5)
 ENST00000563131 (RP11-326A19.5-001) 89201091-89201768 processed_pseudogene
CIL_0002RB_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039202-ENSMUSG00000039194 CGP 10090 7:79273201-79387027
GeneTranscriptPositionBiotype
ENSMUSG00000039194 (Rlbp1)
retinaldehyde binding protein 1 		ENSMUST00000053718 (Rlbp1-201) 79374871-79387027 protein_coding
ENSMUST00000179243 (Rlbp1-202) 79374871-79387027 protein_coding
ENSMUSG00000039202 (Abhd2)
abhydrolase domain containing 2 		ENSMUST00000037315 (Abhd2-001) 79273201-79365508 protein_coding
ENSMUST00000135333 (Abhd2-002) 79273255-79345371 processed_transcript
ENSMUSG00000089453 (Gm24224)
predicted gene, 24224 		ENSMUST00000158828 (Gm24224-201) 79352488-79352745 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002RB_0001ENSDARG00000012504ENSDART00000006897ENSDARG00000025797ENSDART00000035067CIL_0002RB_0002ENSG00000140522ENST00000268125ENST00000563254ENST00000564388ENST00000567787ENSG00000140526ENST00000352732ENST00000355100ENST00000562073ENST00000562254ENST00000564876ENST00000565066ENST00000565825ENST00000565973ENST00000568308ENST00000569411ENST00000569550ENSG00000259699ENST00000558211ENSG00000259948ENST00000563131CIL_0002RB_0003ENSMUSG00000039194ENSMUST00000053718ENSMUST00000179243ENSMUSG00000039202ENSMUST00000037315ENSMUST00000135333ENSMUSG00000089453ENSMUST00000158828
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002RB_0001ENSDARG00000012504ENSDART00000006897ENSDARG00000025797ENSDART00000035067CIL_0002RB_0002ENSG00000140522ENST00000268125ENST00000563254ENST00000564388ENST00000567787ENSG00000140526ENST00000352732ENST00000355100ENST00000562073ENST00000565973ENSG00000259699ENST00000558211ENSG00000259948ENST00000563131CIL_0002RB_0003ENSMUSG00000039194ENSMUST00000053718ENSMUST00000179243ENSMUSG00000039202ENSMUST00000037315ENSMUSG00000089453ENSMUST00000158828
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012504 ENSDART00000006897 N/A N/A N/A 0.247±0.05 N/A N/A 0.115±0.00 0.456±0.11 N/A N/A N/A N/A N/A N/A
ENSDARG00000025797 ENSDART00000035067 N/A N/A N/A 1.196±0.00 N/A N/A 1.226±1.05 N/A 0.852±0.00 N/A 0.331±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140522 ENST00000268125 0.015±0.00 N/A N/A 0.983±0.00 N/A 0.113±0.00 N/A N/A N/A N/A N/A 0.042±0.00 N/A 0.213±0.00
ENST00000563254 0.042±0.00 0.030±0.00 N/A 0.750±0.00 0.032±0.00 0.143±0.00 N/A 0.152±0.00 0.142±0.00 N/A 0.143±0.00 N/A 0.260±0.00 0.231±0.09
ENST00000564388 N/A 0.131±0.00 N/A N/A N/A 0.166±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567787 N/A N/A N/A 0.742±0.00 0.051±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.160±0.00
ENSG00000140526 ENST00000352732 14.935±0.00 3.214±0.00 1.845±0.00 7.434±0.46 7.308±0.17 4.672±0.56 3.458±0.13 26.795±0.00 5.006±0.04 6.827±1.20 4.357±0.00 6.946±2.47 1.102±0.34 10.530±3.47
ENST00000355100 N/A N/A 1.653±0.00 N/A N/A N/A N/A N/A N/A N/A 0.389±0.00 N/A N/A N/A
ENST00000562073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 83.538±0.00
ENST00000562254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.475±2.34
ENST00000568308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259699 ENST00000558211 1.146±0.00 0.619±0.00 N/A 0.369±0.34 0.382±0.14 0.475±0.31 0.342±0.01 1.034±0.00 0.217±0.18 1.096±0.00 0.853±0.00 0.425±0.30 0.153±0.00 0.420±0.29
ENSG00000259948 ENST00000563131 43.287±0.00 17.189±0.00 N/A 23.026±0.00 13.537±0.00 12.927±0.00 18.513±0.00 33.351±0.00 63.721±0.00 32.743±0.00 8.223±2.23 21.155±8.52 7.029±2.46 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039194 ENSMUST00000053718 0.013±0.00 0.051±0.01 0.021±0.00 4.421±1.53 N/A N/A N/A N/A 0.042±0.03 0.177±0.01 N/A N/A 0.564±0.33 0.117±0.05
ENSMUST00000179243 0.014±0.00 0.072±0.04 0.029±0.00 5.331±3.26 0.050±0.03 0.029±0.00 0.028±0.00 0.036±0.03 0.033±0.02 N/A N/A 0.019±0.00 0.221±0.15 0.476±0.36
ENSMUSG00000039202 ENSMUST00000037315 11.551±5.24 175.991±46.04 8.321±3.08 6.419±2.92 11.512±5.18 51.516±2.18 3.838±0.51 15.656±2.02 25.934±22.67 38.368±2.62 0.867±0.20 35.629±3.85 19.752±8.08 20.623±3.94
ENSMUST00000135333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000089453 ENSMUST00000158828 1.388±0.00 0.799±0.00 N/A 0.233±0.20 0.893±0.00 0.554±0.00 N/A N/A 0.283±0.12 0.446±0.00 N/A 3.183±1.84 0.778±0.76 3.388±0.53

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