C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00031Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000054543-ENSDARG00000068965 CGP 7955 15:28913458-29062453
GeneTranscriptPositionBiotype
ENSDARG00000054543 (samsn1a)
SAM domain, SH3 domain and nuclear localisation signals, 1a 		ENSDART00000076749 (samsn1a-002) 28913458-28935841 protein_coding
ENSDART00000099947 (samsn1a-001) 28913468-28922361 protein_coding
ENSDARG00000068965 (nrip1a)
nuclear receptor interacting protein 1a 		ENSDART00000099956 (nrip1a-201) 29058476-29061607 protein_coding
ENSDART00000135540 (nrip1a-001) 29011495-29062453 protein_coding
ENSDARG00000097060 (si:ch211-207n23.3)
si:ch211-207n23.3 		ENSDART00000153603 (si:ch211-207n23.3-001) 28998609-29013793 antisense
ENSDART00000154047 (si:ch211-207n23.3-005) 29013956-29014906 antisense
ENSDART00000154546 (si:ch211-207n23.3-004) 29013101-29014906 antisense
ENSDART00000154746 (si:ch211-207n23.3-003) 29001116-29016303 antisense
ENSDART00000156704 (si:ch211-207n23.3-006) 29014049-29014906 antisense
ENSDART00000156715 (si:ch211-207n23.3-002) 28998609-29000421 antisense
ENSDARG00000097157 (si:ch211-207n23.2)
si:ch211-207n23.2 		ENSDART00000154847 (si:ch211-207n23.2-002) 28942641-28947538 lincRNA
ENSDART00000155153 (si:ch211-207n23.2-001) 28944813-28947773 lincRNA

Danio rerio Ensembl (Zv9)

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CIL_00031Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022876-ENSMUSG00000048490 CGP 10090 16:75858793-76373827
GeneTranscriptPositionBiotype
ENSMUSG00000022876 (Samsn1)
SAM domain, SH3 domain and nuclear localization signals, 1 		ENSMUST00000114239 (Samsn1-003) 75858793-75909310 protein_coding
ENSMUST00000114240 (Samsn1-001) 75858794-76022270 protein_coding
ENSMUST00000139691 (Samsn1-004) 75882531-75909240 retained_intron
ENSMUST00000147447 (Samsn1-006) 75883623-75909310 retained_intron
ENSMUST00000150248 (Samsn1-007) 75888252-75909279 retained_intron
ENSMUSG00000048490 (Nrip1)
nuclear receptor interacting protein 1 		ENSMUST00000054178 (Nrip1-003) 76290862-76373049 protein_coding
ENSMUST00000121927 (Nrip1-001) 76287400-76373827 protein_coding
ENSMUST00000128871 (Nrip1-004) 76328495-76373040 retained_intron
ENSMUST00000140483 (Nrip1-006) 76294646-76323658 protein_coding
ENSMUST00000141182 (Nrip1-005) 76328283-76373037 retained_intron
ENSMUST00000145649 (Nrip1-002) 76351589-76373049 retained_intron
ENSMUSG00000087214 (Gm15555)
predicted gene 15555 		ENSMUST00000128832 (Gm15555-001) 76000784-76009743 lincRNA
ENSMUSG00000098089 (Gm26915)
predicted gene, 26915 		ENSMUST00000183080 (Gm26915-001) 76144977-76145724 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00031Y_0001ENSDARG00000054543ENSDART00000076749ENSDART00000099947ENSDARG00000068965ENSDART00000099956ENSDART00000135540ENSDARG00000097060ENSDART00000153603ENSDART00000154047ENSDART00000154546ENSDART00000154746ENSDART00000156704ENSDART00000156715ENSDARG00000097157ENSDART00000154847ENSDART00000155153CIL_00031Y_0002ENSMUSG00000022876ENSMUST00000114239ENSMUST00000114240ENSMUST00000139691ENSMUST00000147447ENSMUST00000150248ENSMUSG00000048490ENSMUST00000054178ENSMUST00000121927ENSMUST00000128871ENSMUST00000140483ENSMUST00000141182ENSMUST00000145649ENSMUSG00000087214ENSMUST00000128832ENSMUSG00000098089ENSMUST00000183080
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00031Y_0001ENSDARG00000054543ENSDART00000076749ENSDART00000099947ENSDARG00000068965ENSDART00000099956ENSDART00000135540ENSDARG00000097060ENSDART00000153603ENSDART00000154047ENSDART00000154546ENSDART00000154746ENSDART00000156704ENSDART00000156715ENSDARG00000097157ENSDART00000154847ENSDART00000155153CIL_00031Y_0002ENSMUSG00000022876ENSMUST00000114239ENSMUST00000114240ENSMUST00000139691ENSMUST00000147447ENSMUSG00000048490ENSMUST00000054178ENSMUST00000121927ENSMUST00000145649ENSMUSG00000087214ENSMUST00000128832ENSMUSG00000098089ENSMUST00000183080
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000054543 ENSDART00000076749 N/A N/A N/A 0.060±0.00 N/A N/A N/A N/A 0.037±0.00 N/A 0.657±0.00 N/A N/A N/A
ENSDART00000099947 N/A N/A N/A 1.902±0.86 N/A N/A 16.593±11.50 27.179±11.82 0.114±0.00 N/A 2.522±0.00 N/A N/A N/A
ENSDARG00000068965 ENSDART00000099956 N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 N/A 0.181±0.00 N/A N/A N/A
ENSDART00000135540 N/A N/A N/A 3.539±1.92 N/A N/A 3.327±2.58 1.865±0.00 0.425±0.00 N/A 0.620±0.00 N/A N/A N/A
ENSDARG00000097060 ENSDART00000153603 N/A N/A N/A 0.339±0.26 N/A N/A N/A 0.110±0.08 N/A N/A N/A N/A N/A N/A
ENSDART00000154047 N/A N/A N/A 0.827±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000154546 N/A N/A N/A 0.154±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000154746 N/A N/A N/A 0.532±0.39 N/A N/A 0.282±0.00 0.454±0.12 N/A N/A 0.748±0.00 N/A N/A N/A
ENSDART00000156704 N/A N/A N/A 3.072±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156715 N/A N/A N/A 0.055±0.00 N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000097157 ENSDART00000154847 N/A N/A N/A 0.098±0.00 N/A N/A 1.417±0.98 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000155153 N/A N/A N/A 0.423±0.34 N/A N/A 7.049±4.29 10.839±3.31 N/A N/A 3.873±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022876 ENSMUST00000114239 0.812±0.47 0.376±0.18 0.736±0.05 0.410±0.11 3.893±0.88 0.503±0.23 0.271±0.15 0.466±0.32 3.530±3.47 2.240±0.70 0.169±0.29 0.485±0.26 0.437±0.19 0.090±0.10
ENSMUST00000114240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.01
ENSMUST00000139691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.00
ENSMUST00000147447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.150±0.00 0.282±0.00 0.101±0.00 N/A
ENSMUST00000150248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000048490 ENSMUST00000054178 3.530±0.32 2.409±0.00 N/A 1.414±0.00 1.179±0.45 2.135±0.89 0.741±0.22 1.265±0.44 0.552±0.21 1.002±0.18 N/A 2.842±1.16 3.139±1.44 0.866±0.16
ENSMUST00000121927 3.025±0.00 1.876±0.00 0.580±0.00 0.631±0.31 1.319±0.00 N/A 0.267±0.00 N/A 1.013±0.00 N/A 2.314±0.70 5.222±3.03 3.314±3.13 N/A
ENSMUST00000128871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145649 N/A 4.575±0.67 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087214 ENSMUST00000128832 N/A N/A N/A N/A N/A N/A N/A N/A 0.259±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000098089 ENSMUST00000183080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 0.063±0.00 0.205±0.10

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