C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: B-cell linker
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000224337 BLNK-001 ENSG00000095585 9606 - 10:96191702-96271540 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderKidneyLiverOvaryPlacentaENST00000224337
Transcript ID Adrenal Bladder Kidney Liver Ovary Placenta
ENST00000224337 8.488±0.00 2.528±0.00 3.883±1.74 9.132±0.00 3.397±0.00 2.312±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071R CIL_00071R_0002 CGP 10:96043394-96205288
CIL_0001C3 CIL_0001C3_0002 CGP 10:96129715-96271587
CIL_0001C1 CIL_0001C1_0002 CGP 10:96191702-96338564

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005068 TAS transmembrane receptor protein tyrosine kinase adaptor activity
GO:0005070 IDA SH3/SH2 adaptor activity
GO:0005515 IPI protein binding
GO:0005622 NAS intracellular
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0006954 TAS inflammatory response
GO:0006959 TAS humoral immune response
GO:0007169 TAS transmembrane receptor protein tyrosine kinase signaling pathway
GO:0009967 IDA positive regulation of signal transduction
GO:0030183 NAS B cell differentiation
GO:0035556 IDA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054769 Blnk-001 protein_coding Mus_musculus 0 1336
ENSMUST00000117695 Blnk-002 protein_coding Mus_musculus 0 1301
ENSMUST00000134568 Blnk-003 retained_intron Mus_musculus 0 235

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