C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane 239
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055421 Tmem239-001 ENSMUSG00000049692 10090 + 2:130406478-130407902 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055421
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055421 0.072±0.04 0.143±0.06 0.073±0.00 0.091±0.03 0.036±0.00 0.045±0.03 0.032±0.01 0.012±0.01 0.100±0.00 0.125±0.03 0.152±0.10 0.038±0.01 85.342±40.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SG CIL_0007SG_0002 VISTA 2:130051805-130652389
CIL_0000FQ CIL_0000FQ_0002 CGP 2:130390775-130408256
CIL_0000FP CIL_0000FP_0002 CGP 2:130405239-130408256
CIL_00006C CIL_00006C_0002 CGP 2:130405259-130407902
CIL_00006D CIL_00006D_0002 CGP 2:130406478-130424701

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361033 TMEM239-002 protein_coding Homo_sapiens 0 604
ENST00000380593 TMEM239-001 protein_coding Homo_sapiens 0 610

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