C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stimulated by retinoic acid 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055424 Stra13-001 ENSMUSG00000025144 10090 - 11:120710942-120713738 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055424
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055424 31.004±3.43 35.006±8.25 25.902±11.84 10.786±7.42 33.669±12.46 34.817±3.47 8.889±1.65 57.605±1.83 45.916±22.03 29.127±3.28 5.774±0.89 26.251±7.09 21.519±11.65 15.969±7.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VS CIL_0004VS_0002 CGP 11:120672973-120713738
CIL_0004VR CIL_0004VR_0002 CGP 11:120710942-120721128

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000712 ISS resolution of meiotic recombination intermediates
GO:0000776 IEA kinetochore
GO:0003677 ISS DNA binding
GO:0003690 ISS double-stranded DNA binding
GO:0005515 IEA protein binding
GO:0006281 IEA DNA repair
GO:0007067 IEA mitotic nuclear division
GO:0031297 ISS replication fork processing
GO:0043240 ISS Fanconi anaemia nuclear complex
GO:0051382 IEA kinetochore assembly
GO:0071821 ISS FANCM-MHF complex

Homologs

No Homologs available.

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