C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055966 Gabra3-001 ENSMUSG00000031343 10090 - X:72432681-72656186 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055966
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055966 1.745±1.07 0.976±0.26 4.347±0.40 12.250±4.86 1.260±0.31 0.242±0.11 0.524±0.17 1.373±0.50 0.200±0.10 0.669±0.10 0.093±0.05 1.852±0.97 0.196±0.26 0.049±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000115 CIL_000115_0002 CGP X:72432681-72842602

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004890 IEA GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IEA chloride channel activity
GO:0007214 IEA gamma-aminobutyric acid signaling pathway
GO:0030054 IEA cell junction
GO:0034707 IEA chloride channel complex
GO:0045211 IEA postsynaptic membrane
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370314 GABRA3-001 protein_coding Homo_sapiens 0 2244
ENST00000417858 GABRA3-004 processed_transcript Homo_sapiens 0 292
ENST00000497894 GABRA3-003 processed_transcript Homo_sapiens 0 350
ENST00000535043 GABRA3-005 protein_coding Homo_sapiens 0 2010

Loading